Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.11■□□□□ 0.01
SHFQ7M4L6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHFQ7M4L6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SHFQ7M4L6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.11■□□□□ 0.01
SHFQ7M4L6 AC074051.2-201ENST00000565115 352 ntBASIC15.11■□□□□ 0.01
SHFQ7M4L6 AC087388.1-201ENST00000571370 1112 ntBASIC15.11■□□□□ 0.01
SHFQ7M4L6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.11■□□□□ 0.01
SHFQ7M4L6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHFQ7M4L6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SHFQ7M4L6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.11■□□□□ 0.01
SHFQ7M4L6 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHFQ7M4L6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SHFQ7M4L6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHFQ7M4L6 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHFQ7M4L6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.11■□□□□ 0.01
SHFQ7M4L6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.11■□□□□ 0.01
SHFQ7M4L6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SHFQ7M4L6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
SHFQ7M4L6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.11■□□□□ 0.01
SHFQ7M4L6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHFQ7M4L6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHFQ7M4L6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.11■□□□□ 0.01
SHFQ7M4L6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SHFQ7M4L6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHFQ7M4L6 AL021920.2-201ENST00000624828 1351 ntBASIC15.11■□□□□ 0.01
SHFQ7M4L6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHFQ7M4L6 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHFQ7M4L6 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHFQ7M4L6 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SHFQ7M4L6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.1■□□□□ 0.01
SHFQ7M4L6 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHFQ7M4L6 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHFQ7M4L6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SHFQ7M4L6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SHFQ7M4L6 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SHFQ7M4L6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHFQ7M4L6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHFQ7M4L6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.1■□□□□ 0.01
SHFQ7M4L6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHFQ7M4L6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHFQ7M4L6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
SHFQ7M4L6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
SHFQ7M4L6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHFQ7M4L6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.1■□□□□ 0.01
SHFQ7M4L6 SPDYE21P-201ENST00000413323 827 ntBASIC15.1■□□□□ 0.01
SHFQ7M4L6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHFQ7M4L6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.1■□□□□ 0.01
SHFQ7M4L6 HLA-J-202ENST00000469281 1241 ntBASIC15.1■□□□□ 0.01
SHFQ7M4L6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
SHFQ7M4L6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.1■□□□□ 0.01
SHFQ7M4L6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
SHFQ7M4L6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SHFQ7M4L6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHFQ7M4L6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.1■□□□□ 0.01
SHFQ7M4L6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.1■□□□□ 0.01
SHFQ7M4L6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.1■□□□□ 0.01
SHFQ7M4L6 AC092329.2-201ENST00000598402 547 ntBASIC15.1■□□□□ 0.01
SHFQ7M4L6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.1■□□□□ 0.01
SHFQ7M4L6 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SHFQ7M4L6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHFQ7M4L6 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHFQ7M4L6 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SHFQ7M4L6 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHFQ7M4L6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHFQ7M4L6 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHFQ7M4L6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHFQ7M4L6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHFQ7M4L6 AC004817.3-201ENST00000602957 2129 ntBASIC15.1■□□□□ 0.01
SHFQ7M4L6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SHFQ7M4L6 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.09■□□□□ 0.01
SHFQ7M4L6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 AC023824.1-201ENST00000562945 2975 ntBASIC15.09■□□□□ 0.01
SHFQ7M4L6 SIGLEC16-201ENST00000599858 1437 ntBASIC15.09■□□□□ 0.01
SHFQ7M4L6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.09■□□□□ 0.01
SHFQ7M4L6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 AC097637.2-201ENST00000624096 1997 ntBASIC15.09■□□□□ 0.01
SHFQ7M4L6 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SHFQ7M4L6 PKD1P5-201ENST00000532415 10291 ntBASIC15.09■□□□□ 0.01
SHFQ7M4L6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.09■□□□□ 0.01
SHFQ7M4L6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SHFQ7M4L6 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.09■□□□□ 0.01
SHFQ7M4L6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.09■□□□□ 0.01
SHFQ7M4L6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SHFQ7M4L6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SHFQ7M4L6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.09■□□□□ 0.01
SHFQ7M4L6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.09■□□□□ 0.01
SHFQ7M4L6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms