Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 AC007950.2-201ENST00000615045 2347 ntBASIC17.25■□□□□ 0.35
LRRC38Q5VT99 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 AL049840.3-201ENST00000602669 611 ntBASIC17.25■□□□□ 0.35
LRRC38Q5VT99 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.25■□□□□ 0.35
LRRC38Q5VT99 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 AC098831.1-202ENST00000438821 336 ntBASIC17.24■□□□□ 0.35
LRRC38Q5VT99 AC009947.1-201ENST00000444350 727 ntBASIC17.24■□□□□ 0.35
LRRC38Q5VT99 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 RNA5SP419-201ENST00000515908 135 ntBASIC17.24■□□□□ 0.35
LRRC38Q5VT99 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 MIR4751-201ENST00000578027 74 ntBASIC17.24■□□□□ 0.35
LRRC38Q5VT99 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 AL031055.1-201ENST00000606362 631 ntBASIC17.24■□□□□ 0.35
LRRC38Q5VT99 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRRC38Q5VT99 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 AL592424.1-201ENST00000563624 1536 ntBASIC17.23■□□□□ 0.35
LRRC38Q5VT99 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 IGLL3P-201ENST00000412472 434 ntBASIC17.23■□□□□ 0.35
LRRC38Q5VT99 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms