Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 RNU1-129P-201ENST00000384064 167 ntBASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 AC009477.1-201ENST00000452936 217 ntBASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 U1.21-201ENST00000580816 167 ntBASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 PCDH8P1-201ENST00000428983 2773 ntBASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 AGGF1P2-201ENST00000426656 2106 ntBASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTC1Q2NKJ3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 HCG4-201ENST00000418983 998 ntBASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 HLA-V-204ENST00000476601 1289 ntBASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 AC007967.4-201ENST00000614700 386 ntBASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CTC1Q2NKJ3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 AL031055.1-201ENST00000606362 631 ntBASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms