Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CKS1BP61024 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC11.75□□□□□ -0.53
CKS1BP61024 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC11.75□□□□□ -0.53
CKS1BP61024 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC11.75□□□□□ -0.53
CKS1BP61024 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CKS1BP61024 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS1BP61024 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC11.74□□□□□ -0.53
CKS1BP61024 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CKS1BP61024 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS1BP61024 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
CKS1BP61024 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CKS1BP61024 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS1BP61024 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CKS1BP61024 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS1BP61024 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CKS1BP61024 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC11.74□□□□□ -0.53
CKS1BP61024 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC11.74□□□□□ -0.53
CKS1BP61024 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS1BP61024 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC11.74□□□□□ -0.53
CKS1BP61024 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
CKS1BP61024 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS1BP61024 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
CKS1BP61024 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS1BP61024 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC11.74□□□□□ -0.53
CKS1BP61024 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
CKS1BP61024 HMGA1P5-201ENST00000412453 271 ntBASIC11.74□□□□□ -0.53
CKS1BP61024 TSPY7P-201ENST00000431358 1114 ntBASIC11.74□□□□□ -0.53
CKS1BP61024 AC098590.1-201ENST00000468126 897 ntBASIC11.74□□□□□ -0.53
CKS1BP61024 Z99916.2-201ENST00000604037 246 ntBASIC11.74□□□□□ -0.53
CKS1BP61024 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC11.74□□□□□ -0.53
CKS1BP61024 AL157888.1-201ENST00000631930 593 ntBASIC11.74□□□□□ -0.53
CKS1BP61024 CA12-203ENST00000422263 2556 ntTSL 2 BASIC11.74□□□□□ -0.53
CKS1BP61024 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS1BP61024 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC11.74□□□□□ -0.53
CKS1BP61024 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS1BP61024 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS1BP61024 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS1BP61024 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS1BP61024 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC11.74□□□□□ -0.53
CKS1BP61024 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC11.74□□□□□ -0.53
CKS1BP61024 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS1BP61024 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS1BP61024 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS1BP61024 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS1BP61024 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS1BP61024 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
CKS1BP61024 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS1BP61024 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC11.74□□□□□ -0.53
CKS1BP61024 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC11.74□□□□□ -0.53
CKS1BP61024 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
CKS1BP61024 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC11.74□□□□□ -0.53
CKS1BP61024 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS1BP61024 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS1BP61024 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS1BP61024 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC11.74□□□□□ -0.53
CKS1BP61024 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CKS1BP61024 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
CKS1BP61024 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC11.74□□□□□ -0.53
CKS1BP61024 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS1BP61024 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS1BP61024 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS1BP61024 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS1BP61024 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
CKS1BP61024 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS1BP61024 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
CKS1BP61024 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS1BP61024 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS1BP61024 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS1BP61024 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CKS1BP61024 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS1BP61024 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS1BP61024 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
CKS1BP61024 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS1BP61024 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS1BP61024 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS1BP61024 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC11.73□□□□□ -0.53
CKS1BP61024 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS1BP61024 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CKS1BP61024 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC11.73□□□□□ -0.53
CKS1BP61024 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
CKS1BP61024 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS1BP61024 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CKS1BP61024 TSPY12P-201ENST00000421279 868 ntBASIC11.73□□□□□ -0.53
CKS1BP61024 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC11.73□□□□□ -0.53
CKS1BP61024 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC11.73□□□□□ -0.53
CKS1BP61024 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC11.73□□□□□ -0.53
CKS1BP61024 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC11.73□□□□□ -0.53
CKS1BP61024 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC11.73□□□□□ -0.53
CKS1BP61024 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC11.73□□□□□ -0.53
CKS1BP61024 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC11.73□□□□□ -0.53
CKS1BP61024 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS1BP61024 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CKS1BP61024 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CKS1BP61024 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
CKS1BP61024 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC11.73□□□□□ -0.53
CKS1BP61024 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC11.73□□□□□ -0.53
CKS1BP61024 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC11.73□□□□□ -0.53
CKS1BP61024 NT5C-210ENST00000582160 860 ntTSL 2 BASIC11.73□□□□□ -0.53
CKS1BP61024 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC11.73□□□□□ -0.53
CKS1BP61024 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms