Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NUBP1P53384 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.57■□□□□ 0.24
NUBP1P53384 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC16.57■□□□□ 0.24
NUBP1P53384 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.57■□□□□ 0.24
NUBP1P53384 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.57■□□□□ 0.24
NUBP1P53384 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.57■□□□□ 0.24
NUBP1P53384 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.57■□□□□ 0.24
NUBP1P53384 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.57■□□□□ 0.24
NUBP1P53384 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUBP1P53384 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUBP1P53384 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NUBP1P53384 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NUBP1P53384 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.56■□□□□ 0.24
NUBP1P53384 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NUBP1P53384 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.56■□□□□ 0.24
NUBP1P53384 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NUBP1P53384 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUBP1P53384 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.56■□□□□ 0.24
NUBP1P53384 KRT18P55-202ENST00000578578 1546 ntBASIC16.56■□□□□ 0.24
NUBP1P53384 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
NUBP1P53384 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NUBP1P53384 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NUBP1P53384 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.56■□□□□ 0.24
NUBP1P53384 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.56■□□□□ 0.24
NUBP1P53384 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUBP1P53384 LYG1-201ENST00000308528 990 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUBP1P53384 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
NUBP1P53384 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC16.56■□□□□ 0.24
NUBP1P53384 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NUBP1P53384 SPDYE17-201ENST00000412399 783 ntBASIC16.56■□□□□ 0.24
NUBP1P53384 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.56■□□□□ 0.24
NUBP1P53384 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NUBP1P53384 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.56■□□□□ 0.24
NUBP1P53384 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.56■□□□□ 0.24
NUBP1P53384 RNA5SP410-201ENST00000516285 106 ntBASIC16.56■□□□□ 0.24
NUBP1P53384 AP002981.1-201ENST00000517692 975 ntBASIC16.56■□□□□ 0.24
NUBP1P53384 SLC25A47P1-201ENST00000531577 414 ntBASIC16.56■□□□□ 0.24
NUBP1P53384 TRAV11-201ENST00000539512 339 ntBASIC16.56■□□□□ 0.24
NUBP1P53384 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.56■□□□□ 0.24
NUBP1P53384 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC16.56■□□□□ 0.24
NUBP1P53384 AL731537.2-201ENST00000561565 951 ntBASIC16.56■□□□□ 0.24
NUBP1P53384 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.56■□□□□ 0.24
NUBP1P53384 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.56■□□□□ 0.24
NUBP1P53384 BNIP3P40-201ENST00000596017 556 ntBASIC16.56■□□□□ 0.24
NUBP1P53384 AC079598.2-201ENST00000599191 1294 ntBASIC16.56■□□□□ 0.24
NUBP1P53384 AC068057.2-201ENST00000624047 895 ntBASIC16.56■□□□□ 0.24
NUBP1P53384 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NUBP1P53384 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NUBP1P53384 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NUBP1P53384 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NUBP1P53384 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.56■□□□□ 0.24
NUBP1P53384 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.56■□□□□ 0.24
NUBP1P53384 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.56■□□□□ 0.24
NUBP1P53384 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUBP1P53384 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NUBP1P53384 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUBP1P53384 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUBP1P53384 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NUBP1P53384 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
NUBP1P53384 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
NUBP1P53384 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.55■□□□□ 0.24
NUBP1P53384 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUBP1P53384 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NUBP1P53384 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUBP1P53384 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUBP1P53384 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NUBP1P53384 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NUBP1P53384 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUBP1P53384 RNF148-201ENST00000434824 1304 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
NUBP1P53384 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NUBP1P53384 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.55■□□□□ 0.24
NUBP1P53384 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUBP1P53384 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUBP1P53384 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUBP1P53384 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUBP1P53384 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUBP1P53384 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.55■□□□□ 0.24
NUBP1P53384 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.55■□□□□ 0.24
NUBP1P53384 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUBP1P53384 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.55■□□□□ 0.24
NUBP1P53384 MTND3P20-201ENST00000407663 186 ntBASIC16.55■□□□□ 0.24
NUBP1P53384 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.55■□□□□ 0.24
NUBP1P53384 MTND2P12-201ENST00000417560 1252 ntBASIC16.55■□□□□ 0.24
NUBP1P53384 AC098850.1-201ENST00000419919 790 ntBASIC16.55■□□□□ 0.24
NUBP1P53384 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NUBP1P53384 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.55■□□□□ 0.24
NUBP1P53384 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.55■□□□□ 0.24
NUBP1P53384 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.55■□□□□ 0.24
NUBP1P53384 AC098862.1-201ENST00000504991 413 ntBASIC16.55■□□□□ 0.24
NUBP1P53384 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC16.55■□□□□ 0.24
NUBP1P53384 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.55■□□□□ 0.24
NUBP1P53384 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.55■□□□□ 0.24
NUBP1P53384 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.55■□□□□ 0.24
NUBP1P53384 AC026979.4-201ENST00000606555 645 ntBASIC16.55■□□□□ 0.24
NUBP1P53384 AC026979.3-201ENST00000607315 403 ntBASIC16.55■□□□□ 0.24
NUBP1P53384 MIR6069-201ENST00000620069 79 ntBASIC16.55■□□□□ 0.24
NUBP1P53384 AC017037.4-201ENST00000624526 826 ntBASIC16.55■□□□□ 0.24
NUBP1P53384 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NUBP1P53384 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUBP1P53384 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms