Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 DRAXINP1-201ENST00000437611 948 ntBASIC16.25■□□□□ 0.19
EPHA3P29320 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.25■□□□□ 0.19
EPHA3P29320 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
EPHA3P29320 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
EPHA3P29320 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA3P29320 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
EPHA3P29320 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA3P29320 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.25■□□□□ 0.19
EPHA3P29320 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA3P29320 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA3P29320 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.25■□□□□ 0.19
EPHA3P29320 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA3P29320 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
EPHA3P29320 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA3P29320 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
EPHA3P29320 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA3P29320 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.25■□□□□ 0.19
EPHA3P29320 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA3P29320 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA3P29320 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA3P29320 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.24■□□□□ 0.19
EPHA3P29320 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA3P29320 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.24■□□□□ 0.19
EPHA3P29320 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.24■□□□□ 0.19
EPHA3P29320 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
EPHA3P29320 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
EPHA3P29320 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.24■□□□□ 0.19
EPHA3P29320 AC079776.2-201ENST00000641154 1609 ntBASIC16.24■□□□□ 0.19
EPHA3P29320 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.24■□□□□ 0.19
EPHA3P29320 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.24■□□□□ 0.19
EPHA3P29320 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA3P29320 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA3P29320 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.24■□□□□ 0.19
EPHA3P29320 AL031133.1-201ENST00000406807 723 ntBASIC16.24■□□□□ 0.19
EPHA3P29320 TSSC2-201ENST00000450217 709 ntBASIC16.24■□□□□ 0.19
EPHA3P29320 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.24■□□□□ 0.19
EPHA3P29320 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
EPHA3P29320 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.24■□□□□ 0.19
EPHA3P29320 AL353135.1-201ENST00000606729 504 ntBASIC16.24■□□□□ 0.19
EPHA3P29320 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA3P29320 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
EPHA3P29320 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA3P29320 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA3P29320 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.24■□□□□ 0.19
EPHA3P29320 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
EPHA3P29320 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.24■□□□□ 0.19
EPHA3P29320 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA3P29320 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA3P29320 AC002310.6-201ENST00000624451 1377 ntBASIC16.24■□□□□ 0.19
EPHA3P29320 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA3P29320 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA3P29320 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA3P29320 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
EPHA3P29320 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.23■□□□□ 0.19
EPHA3P29320 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA3P29320 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA3P29320 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
EPHA3P29320 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
EPHA3P29320 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA3P29320 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.23■□□□□ 0.19
EPHA3P29320 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
EPHA3P29320 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA3P29320 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA3P29320 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA3P29320 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA3P29320 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA3P29320 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA3P29320 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA3P29320 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA3P29320 AP002383.4-201ENST00000442518 975 ntBASIC16.23■□□□□ 0.19
EPHA3P29320 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA3P29320 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA3P29320 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.23■□□□□ 0.19
EPHA3P29320 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.23■□□□□ 0.19
EPHA3P29320 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.23■□□□□ 0.19
EPHA3P29320 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.23■□□□□ 0.19
EPHA3P29320 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.23■□□□□ 0.19
EPHA3P29320 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.23■□□□□ 0.19
EPHA3P29320 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA3P29320 AL121956.5-201ENST00000625261 221 ntBASIC16.23■□□□□ 0.19
EPHA3P29320 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA3P29320 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA3P29320 AC126177.1-201ENST00000547829 2218 ntBASIC16.23■□□□□ 0.19
EPHA3P29320 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA3P29320 TOP3BP1-201ENST00000420768 1380 ntBASIC16.23■□□□□ 0.19
EPHA3P29320 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA3P29320 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
EPHA3P29320 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.23■□□□□ 0.19
EPHA3P29320 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA3P29320 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.22■□□□□ 0.19
EPHA3P29320 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA3P29320 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
EPHA3P29320 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA3P29320 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA3P29320 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.22■□□□□ 0.19
EPHA3P29320 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA3P29320 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA3P29320 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA3P29320 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA3P29320 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms