Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN3P20807 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN3P20807 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN3P20807 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN3P20807 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CAPN3P20807 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN3P20807 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN3P20807 AC010491.1-201ENST00000563101 2797 ntBASIC16.07■□□□□ 0.16
CAPN3P20807 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.07■□□□□ 0.16
CAPN3P20807 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN3P20807 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
CAPN3P20807 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CAPN3P20807 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN3P20807 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CAPN3P20807 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CAPN3P20807 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN3P20807 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.07■□□□□ 0.16
CAPN3P20807 MINOS1P3-201ENST00000457048 203 ntBASIC16.07■□□□□ 0.16
CAPN3P20807 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CAPN3P20807 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN3P20807 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.07■□□□□ 0.16
CAPN3P20807 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN3P20807 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.07■□□□□ 0.16
CAPN3P20807 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN3P20807 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN3P20807 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN3P20807 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CAPN3P20807 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN3P20807 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN3P20807 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
CAPN3P20807 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN3P20807 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN3P20807 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN3P20807 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CAPN3P20807 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN3P20807 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.07■□□□□ 0.16
CAPN3P20807 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CAPN3P20807 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.07■□□□□ 0.16
CAPN3P20807 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN3P20807 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN3P20807 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN3P20807 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN3P20807 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN3P20807 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CAPN3P20807 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN3P20807 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN3P20807 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CAPN3P20807 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN3P20807 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN3P20807 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN3P20807 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN3P20807 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN3P20807 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN3P20807 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CAPN3P20807 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.06■□□□□ 0.16
CAPN3P20807 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN3P20807 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN3P20807 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN3P20807 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.06■□□□□ 0.16
CAPN3P20807 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN3P20807 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN3P20807 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN3P20807 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN3P20807 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN3P20807 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN3P20807 BX842568.4-201ENST00000421222 227 ntBASIC16.06■□□□□ 0.16
CAPN3P20807 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.06■□□□□ 0.16
CAPN3P20807 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN3P20807 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN3P20807 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.06■□□□□ 0.16
CAPN3P20807 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN3P20807 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN3P20807 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN3P20807 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN3P20807 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.06■□□□□ 0.16
CAPN3P20807 TERC-201ENST00000602385 541 ntBASIC16.06■□□□□ 0.16
CAPN3P20807 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.06■□□□□ 0.16
CAPN3P20807 AC073592.4-201ENST00000623827 446 ntBASIC16.06■□□□□ 0.16
CAPN3P20807 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN3P20807 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CAPN3P20807 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CAPN3P20807 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN3P20807 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN3P20807 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CAPN3P20807 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CAPN3P20807 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN3P20807 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN3P20807 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN3P20807 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.05■□□□□ 0.16
CAPN3P20807 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN3P20807 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.05■□□□□ 0.16
CAPN3P20807 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CAPN3P20807 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.05■□□□□ 0.16
CAPN3P20807 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN3P20807 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN3P20807 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CAPN3P20807 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.05■□□□□ 0.16
CAPN3P20807 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN3P20807 AL590787.1-201ENST00000568856 1315 ntBASIC16.05■□□□□ 0.16
CAPN3P20807 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms