Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
TOP2AP11388 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
TOP2AP11388 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
TOP2AP11388 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
TOP2AP11388 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC28.57■■■□□ 2.16
TOP2AP11388 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
TOP2AP11388 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
TOP2AP11388 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC28.57■■■□□ 2.16
TOP2AP11388 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC28.57■■■□□ 2.16
TOP2AP11388 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC28.57■■■□□ 2.16
TOP2AP11388 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC28.57■■■□□ 2.16
TOP2AP11388 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
TOP2AP11388 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC28.57■■■□□ 2.16
TOP2AP11388 BRI3BPP1-201ENST00000594224 787 ntBASIC28.57■■■□□ 2.16
TOP2AP11388 SPIB-207ENST00000597855 564 ntTSL 4 BASIC28.57■■■□□ 2.16
TOP2AP11388 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC28.57■■■□□ 2.16
TOP2AP11388 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC28.57■■■□□ 2.16
TOP2AP11388 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
TOP2AP11388 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
TOP2AP11388 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC28.56■■■□□ 2.16
TOP2AP11388 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC28.56■■■□□ 2.16
TOP2AP11388 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
TOP2AP11388 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC28.56■■■□□ 2.16
TOP2AP11388 REXO1L6P-201ENST00000603433 1515 ntBASIC28.56■■■□□ 2.16
TOP2AP11388 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC28.56■■■□□ 2.16
TOP2AP11388 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
TOP2AP11388 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC28.56■■■□□ 2.16
TOP2AP11388 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC28.56■■■□□ 2.16
TOP2AP11388 AC036164.1-201ENST00000570544 333 ntBASIC28.56■■■□□ 2.16
TOP2AP11388 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC28.56■■■□□ 2.16
TOP2AP11388 AC133552.6-201ENST00000613406 534 ntBASIC28.56■■■□□ 2.16
TOP2AP11388 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC28.56■■■□□ 2.16
TOP2AP11388 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC28.56■■■□□ 2.16
TOP2AP11388 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC28.56■■■□□ 2.16
TOP2AP11388 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
TOP2AP11388 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC28.56■■■□□ 2.16
TOP2AP11388 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
TOP2AP11388 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC28.56■■■□□ 2.16
TOP2AP11388 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
TOP2AP11388 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
TOP2AP11388 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
TOP2AP11388 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
TOP2AP11388 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
TOP2AP11388 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC28.55■■■□□ 2.16
TOP2AP11388 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
TOP2AP11388 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
TOP2AP11388 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC28.55■■■□□ 2.16
TOP2AP11388 RPL28-204ENST00000431533 590 ntTSL 2 BASIC28.55■■■□□ 2.16
TOP2AP11388 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC28.55■■■□□ 2.16
TOP2AP11388 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC28.55■■■□□ 2.16
TOP2AP11388 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
TOP2AP11388 RPL28-206ENST00000558752 671 ntTSL 3 BASIC28.55■■■□□ 2.16
TOP2AP11388 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC28.55■■■□□ 2.16
TOP2AP11388 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC28.55■■■□□ 2.16
TOP2AP11388 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC28.55■■■□□ 2.16
TOP2AP11388 AC124283.3-201ENST00000570869 594 ntBASIC28.55■■■□□ 2.16
TOP2AP11388 PAM16-215ENST00000577031 548 ntTSL 4 BASIC28.55■■■□□ 2.16
TOP2AP11388 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC28.55■■■□□ 2.16
TOP2AP11388 AC233724.13-201ENST00000598383 410 ntBASIC28.55■■■□□ 2.16
TOP2AP11388 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC28.55■■■□□ 2.16
TOP2AP11388 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC28.55■■■□□ 2.16
TOP2AP11388 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
TOP2AP11388 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
TOP2AP11388 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC28.55■■■□□ 2.16
TOP2AP11388 AMT-232ENST00000636199 1546 ntTSL 5 BASIC28.55■■■□□ 2.16
TOP2AP11388 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC28.55■■■□□ 2.16
TOP2AP11388 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TOP2AP11388 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC28.54■■■□□ 2.16
TOP2AP11388 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TOP2AP11388 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC28.54■■■□□ 2.16
TOP2AP11388 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC28.54■■■□□ 2.16
TOP2AP11388 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC28.54■■■□□ 2.16
TOP2AP11388 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC28.54■■■□□ 2.16
TOP2AP11388 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC28.54■■■□□ 2.16
TOP2AP11388 AL033527.5-201ENST00000641382 801 ntBASIC28.54■■■□□ 2.16
TOP2AP11388 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
TOP2AP11388 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC28.54■■■□□ 2.16
TOP2AP11388 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
TOP2AP11388 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC28.54■■■□□ 2.16
TOP2AP11388 DEK-201ENST00000244776 1441 ntTSL 2 BASIC28.54■■■□□ 2.16
TOP2AP11388 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC28.54■■■□□ 2.16
TOP2AP11388 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC28.54■■■□□ 2.16
TOP2AP11388 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TOP2AP11388 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC28.54■■■□□ 2.16
TOP2AP11388 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
TOP2AP11388 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
TOP2AP11388 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC28.53■■■□□ 2.16
TOP2AP11388 AL162726.2-201ENST00000438986 1017 ntBASIC28.53■■■□□ 2.16
TOP2AP11388 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC28.53■■■□□ 2.16
TOP2AP11388 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC28.53■■■□□ 2.16
TOP2AP11388 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC28.53■■■□□ 2.16
TOP2AP11388 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC28.53■■■□□ 2.16
TOP2AP11388 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
TOP2AP11388 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
TOP2AP11388 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
TOP2AP11388 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
TOP2AP11388 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
TOP2AP11388 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
TOP2AP11388 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
TOP2AP11388 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC28.53■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms