Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXC6P09630 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC6P09630 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HOXC6P09630 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC6P09630 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC6P09630 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXC6P09630 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC6P09630 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HOXC6P09630 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC6P09630 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC6P09630 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC6P09630 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC6P09630 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC6P09630 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HOXC6P09630 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC6P09630 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC6P09630 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC6P09630 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC6P09630 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC6P09630 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXC6P09630 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC6P09630 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC6P09630 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC6P09630 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC6P09630 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
HOXC6P09630 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HOXC6P09630 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
HOXC6P09630 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.63■□□□□ 0.57
HOXC6P09630 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.63■□□□□ 0.57
HOXC6P09630 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC6P09630 SERBP1P3-201ENST00000459980 809 ntBASIC18.63■□□□□ 0.57
HOXC6P09630 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HOXC6P09630 SPDYE18-201ENST00000510091 1050 ntBASIC18.63■□□□□ 0.57
HOXC6P09630 WASH4P-201ENST00000564273 1246 ntBASIC18.63■□□□□ 0.57
HOXC6P09630 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.63■□□□□ 0.57
HOXC6P09630 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXC6P09630 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.63■□□□□ 0.57
HOXC6P09630 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.63■□□□□ 0.57
HOXC6P09630 AC132938.2-201ENST00000579188 680 ntBASIC18.63■□□□□ 0.57
HOXC6P09630 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXC6P09630 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC6P09630 AC008494.3-201ENST00000606615 944 ntBASIC18.63■□□□□ 0.57
HOXC6P09630 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
HOXC6P09630 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.63■□□□□ 0.57
HOXC6P09630 AL591163.1-201ENST00000641757 987 ntBASIC18.63■□□□□ 0.57
HOXC6P09630 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC6P09630 KRT8P12-202ENST00000472924 1397 ntBASIC18.63■□□□□ 0.57
HOXC6P09630 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXC6P09630 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.63■□□□□ 0.57
HOXC6P09630 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HOXC6P09630 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.63■□□□□ 0.57
HOXC6P09630 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC6P09630 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.63■□□□□ 0.57
HOXC6P09630 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HOXC6P09630 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC6P09630 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
HOXC6P09630 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC6P09630 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.62■□□□□ 0.57
HOXC6P09630 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC6P09630 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXC6P09630 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.62■□□□□ 0.57
HOXC6P09630 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC6P09630 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.62■□□□□ 0.57
HOXC6P09630 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.62■□□□□ 0.57
HOXC6P09630 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXC6P09630 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXC6P09630 AC093724.1-201ENST00000448659 1027 ntBASIC18.62■□□□□ 0.57
HOXC6P09630 ACA64.2-201ENST00000459014 129 ntBASIC18.62■□□□□ 0.57
HOXC6P09630 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC6P09630 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.62■□□□□ 0.57
HOXC6P09630 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXC6P09630 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.62■□□□□ 0.57
HOXC6P09630 AC024267.1-201ENST00000582320 895 ntBASIC18.62■□□□□ 0.57
HOXC6P09630 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.62■□□□□ 0.57
HOXC6P09630 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.62■□□□□ 0.57
HOXC6P09630 AC017083.2-201ENST00000608069 979 ntBASIC18.62■□□□□ 0.57
HOXC6P09630 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.62■□□□□ 0.57
HOXC6P09630 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC6P09630 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.62■□□□□ 0.57
HOXC6P09630 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC6P09630 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC6P09630 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC6P09630 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC6P09630 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC6P09630 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC6P09630 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC6P09630 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC6P09630 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC6P09630 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.61■□□□□ 0.57
HOXC6P09630 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.61■□□□□ 0.57
HOXC6P09630 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HOXC6P09630 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
HOXC6P09630 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
HOXC6P09630 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
HOXC6P09630 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC6P09630 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC6P09630 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC6P09630 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.61■□□□□ 0.57
HOXC6P09630 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC6P09630 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms