Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.7■□□□□ 0.26
MMP2P08253 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP2P08253 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.7■□□□□ 0.26
MMP2P08253 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MMP2P08253 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MMP2P08253 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP2P08253 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.7■□□□□ 0.26
MMP2P08253 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP2P08253 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.7■□□□□ 0.26
MMP2P08253 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP2P08253 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MMP2P08253 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP2P08253 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP2P08253 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP2P08253 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP2P08253 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP2P08253 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MMP2P08253 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MMP2P08253 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP2P08253 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.7■□□□□ 0.26
MMP2P08253 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP2P08253 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MMP2P08253 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
MMP2P08253 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP2P08253 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MMP2P08253 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.69■□□□□ 0.26
MMP2P08253 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP2P08253 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP2P08253 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MMP2P08253 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP2P08253 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MMP2P08253 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP2P08253 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP2P08253 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
MMP2P08253 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP2P08253 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP2P08253 KRT18P34-201ENST00000488218 1270 ntBASIC16.69■□□□□ 0.26
MMP2P08253 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.69■□□□□ 0.26
MMP2P08253 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.69■□□□□ 0.26
MMP2P08253 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP2P08253 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MMP2P08253 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.69■□□□□ 0.26
MMP2P08253 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP2P08253 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP2P08253 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
MMP2P08253 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP2P08253 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
MMP2P08253 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
MMP2P08253 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP2P08253 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MMP2P08253 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.68■□□□□ 0.26
MMP2P08253 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.68■□□□□ 0.26
MMP2P08253 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.68■□□□□ 0.26
MMP2P08253 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.68■□□□□ 0.26
MMP2P08253 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP2P08253 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP2P08253 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP2P08253 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
MMP2P08253 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
MMP2P08253 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
MMP2P08253 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
MMP2P08253 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.68■□□□□ 0.26
MMP2P08253 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP2P08253 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.68■□□□□ 0.26
MMP2P08253 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
MMP2P08253 HTR5BP-201ENST00000430851 1154 ntBASIC16.68■□□□□ 0.26
MMP2P08253 POU5F1P6-201ENST00000466990 990 ntBASIC16.68■□□□□ 0.26
MMP2P08253 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.68■□□□□ 0.26
MMP2P08253 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.68■□□□□ 0.26
MMP2P08253 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
MMP2P08253 RARRES2P8-201ENST00000566335 367 ntBASIC16.68■□□□□ 0.26
MMP2P08253 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
MMP2P08253 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
MMP2P08253 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP2P08253 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.68■□□□□ 0.26
MMP2P08253 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MMP2P08253 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MMP2P08253 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
MMP2P08253 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.67■□□□□ 0.26
MMP2P08253 AC005622.1-201ENST00000636801 1703 ntBASIC16.67■□□□□ 0.26
MMP2P08253 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.67■□□□□ 0.26
MMP2P08253 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP2P08253 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP2P08253 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.67■□□□□ 0.26
MMP2P08253 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP2P08253 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
MMP2P08253 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.67■□□□□ 0.26
MMP2P08253 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.67■□□□□ 0.26
MMP2P08253 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MMP2P08253 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP2P08253 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
MMP2P08253 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP2P08253 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP2P08253 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP2P08253 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.67■□□□□ 0.26
MMP2P08253 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MMP2P08253 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MMP2P08253 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.67■□□□□ 0.26
MMP2P08253 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MMP2P08253 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms