Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RETP07949 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.77■□□□□ 0.27
RETP07949 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RETP07949 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.77■□□□□ 0.27
RETP07949 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.76■□□□□ 0.27
RETP07949 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
RETP07949 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RETP07949 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.76■□□□□ 0.27
RETP07949 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.76■□□□□ 0.27
RETP07949 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RETP07949 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RETP07949 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RETP07949 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RETP07949 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RETP07949 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
RETP07949 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RETP07949 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.76■□□□□ 0.27
RETP07949 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RETP07949 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RETP07949 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
RETP07949 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RETP07949 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.76■□□□□ 0.27
RETP07949 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
RETP07949 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
RETP07949 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RETP07949 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.76■□□□□ 0.27
RETP07949 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RETP07949 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RETP07949 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.76■□□□□ 0.27
RETP07949 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.76■□□□□ 0.27
RETP07949 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.76■□□□□ 0.27
RETP07949 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.76■□□□□ 0.27
RETP07949 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.76■□□□□ 0.27
RETP07949 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.76■□□□□ 0.27
RETP07949 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RETP07949 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RETP07949 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RETP07949 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.76■□□□□ 0.27
RETP07949 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RETP07949 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.76■□□□□ 0.27
RETP07949 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RETP07949 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RETP07949 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RETP07949 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RETP07949 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RETP07949 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RETP07949 AC012569.1-201ENST00000591191 1524 ntBASIC16.75■□□□□ 0.27
RETP07949 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RETP07949 TNRC18P3-201ENST00000441896 2691 ntBASIC16.75■□□□□ 0.27
RETP07949 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RETP07949 AC046185.3-201ENST00000623228 1824 ntBASIC16.75■□□□□ 0.27
RETP07949 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RETP07949 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RETP07949 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RETP07949 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RETP07949 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RETP07949 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.75■□□□□ 0.27
RETP07949 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RETP07949 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RETP07949 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
RETP07949 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RETP07949 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RETP07949 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RETP07949 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.75■□□□□ 0.27
RETP07949 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.75■□□□□ 0.27
RETP07949 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RETP07949 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.75■□□□□ 0.27
RETP07949 AC027307.2-201ENST00000591252 911 ntBASIC16.75■□□□□ 0.27
RETP07949 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RETP07949 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RETP07949 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.75■□□□□ 0.27
RETP07949 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RETP07949 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RETP07949 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RETP07949 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RETP07949 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RETP07949 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RETP07949 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RETP07949 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.74■□□□□ 0.27
RETP07949 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.74■□□□□ 0.27
RETP07949 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.74■□□□□ 0.27
RETP07949 AC138969.3-201ENST00000546612 1459 ntBASIC16.74■□□□□ 0.27
RETP07949 AC138932.2-201ENST00000548268 1459 ntBASIC16.74■□□□□ 0.27
RETP07949 AC126755.4-201ENST00000549796 1459 ntBASIC16.74■□□□□ 0.27
RETP07949 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.74■□□□□ 0.27
RETP07949 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RETP07949 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RETP07949 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RETP07949 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.74■□□□□ 0.27
RETP07949 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RETP07949 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RETP07949 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.74■□□□□ 0.27
RETP07949 RPS2P32-201ENST00000439199 892 ntBASIC16.74■□□□□ 0.27
RETP07949 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.74■□□□□ 0.27
RETP07949 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.74■□□□□ 0.27
RETP07949 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.74■□□□□ 0.27
RETP07949 GIMAP3P-201ENST00000495150 836 ntBASIC16.74■□□□□ 0.27
RETP07949 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RETP07949 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RETP07949 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms