Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD74P04233 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CD74P04233 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.02□□□□□ -0.16
CD74P04233 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.02□□□□□ -0.16
CD74P04233 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CD74P04233 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CD74P04233 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.02□□□□□ -0.16
CD74P04233 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.02□□□□□ -0.16
CD74P04233 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD74P04233 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.02□□□□□ -0.17
CD74P04233 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD74P04233 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.02□□□□□ -0.17
CD74P04233 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.02□□□□□ -0.17
CD74P04233 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CD74P04233 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CD74P04233 LIN28AP1-201ENST00000429574 405 ntBASIC14.02□□□□□ -0.17
CD74P04233 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.02□□□□□ -0.17
CD74P04233 AC112907.2-201ENST00000448639 330 ntBASIC14.02□□□□□ -0.17
CD74P04233 AC010203.1-204ENST00000548782 407 ntBASIC14.02□□□□□ -0.17
CD74P04233 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.02□□□□□ -0.17
CD74P04233 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD74P04233 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CD74P04233 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CD74P04233 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD74P04233 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.02□□□□□ -0.17
CD74P04233 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.02□□□□□ -0.17
CD74P04233 AC004817.3-201ENST00000602957 2129 ntBASIC14.02□□□□□ -0.17
CD74P04233 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CD74P04233 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CD74P04233 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD74P04233 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD74P04233 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.01□□□□□ -0.17
CD74P04233 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CD74P04233 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.01□□□□□ -0.17
CD74P04233 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.01□□□□□ -0.17
CD74P04233 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CD74P04233 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD74P04233 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CD74P04233 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD74P04233 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.01□□□□□ -0.17
CD74P04233 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD74P04233 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD74P04233 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.01□□□□□ -0.17
CD74P04233 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD74P04233 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD74P04233 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD74P04233 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD74P04233 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD74P04233 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CD74P04233 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD74P04233 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.01□□□□□ -0.17
CD74P04233 AL596275.1-201ENST00000423464 877 ntBASIC14.01□□□□□ -0.17
CD74P04233 HOMER2P1-201ENST00000455653 964 ntBASIC14.01□□□□□ -0.17
CD74P04233 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD74P04233 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.01□□□□□ -0.17
CD74P04233 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.01□□□□□ -0.17
CD74P04233 MIR4492-201ENST00000581627 80 ntBASIC14.01□□□□□ -0.17
CD74P04233 AC090616.6-201ENST00000582640 721 ntBASIC14.01□□□□□ -0.17
CD74P04233 AC139887.4-201ENST00000607877 719 ntBASIC14.01□□□□□ -0.17
CD74P04233 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
CD74P04233 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD74P04233 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD74P04233 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD74P04233 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.01□□□□□ -0.17
CD74P04233 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.01□□□□□ -0.17
CD74P04233 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD74P04233 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CD74P04233 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD74P04233 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD74P04233 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.01□□□□□ -0.17
CD74P04233 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.01□□□□□ -0.17
CD74P04233 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CD74P04233 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14□□□□□ -0.17
CD74P04233 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14□□□□□ -0.17
CD74P04233 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD74P04233 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14□□□□□ -0.17
CD74P04233 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD74P04233 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14□□□□□ -0.17
CD74P04233 PC-214ENST00000628663 1470 ntTSL 5 BASIC14□□□□□ -0.17
CD74P04233 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14□□□□□ -0.17
CD74P04233 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CD74P04233 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14□□□□□ -0.17
CD74P04233 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD74P04233 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD74P04233 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CD74P04233 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD74P04233 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
CD74P04233 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14□□□□□ -0.17
CD74P04233 LINC00982-205ENST00000420957 435 ntBASIC14□□□□□ -0.17
CD74P04233 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14□□□□□ -0.17
CD74P04233 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14□□□□□ -0.17
CD74P04233 BX664615.1-201ENST00000443558 458 ntBASIC14□□□□□ -0.17
CD74P04233 SPDYE13P-201ENST00000445314 798 ntBASIC14□□□□□ -0.17
CD74P04233 ATP5G1P1-201ENST00000448724 379 ntBASIC14□□□□□ -0.17
CD74P04233 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14□□□□□ -0.17
CD74P04233 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14□□□□□ -0.17
CD74P04233 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14□□□□□ -0.17
CD74P04233 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14□□□□□ -0.17
CD74P04233 AC010654.1-201ENST00000615722 808 ntBASIC14□□□□□ -0.17
CD74P04233 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms