Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.96■□□□□ 0.47
CHRNA1P02708 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA1P02708 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA1P02708 ZNF890P-202ENST00000530367 1156 ntBASIC17.96■□□□□ 0.47
CHRNA1P02708 AC135586.1-201ENST00000539323 574 ntBASIC17.96■□□□□ 0.47
CHRNA1P02708 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.96■□□□□ 0.47
CHRNA1P02708 AL512361.1-201ENST00000554200 418 ntBASIC17.96■□□□□ 0.47
CHRNA1P02708 TP53TG3HP-202ENST00000569755 579 ntBASIC17.96■□□□□ 0.47
CHRNA1P02708 AC061975.2-201ENST00000581722 295 ntBASIC17.96■□□□□ 0.47
CHRNA1P02708 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CHRNA1P02708 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.96■□□□□ 0.47
CHRNA1P02708 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.96■□□□□ 0.47
CHRNA1P02708 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.47
CHRNA1P02708 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA1P02708 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA1P02708 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA1P02708 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA1P02708 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA1P02708 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA1P02708 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA1P02708 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.96■□□□□ 0.47
CHRNA1P02708 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.96■□□□□ 0.47
CHRNA1P02708 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.46
CHRNA1P02708 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CHRNA1P02708 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA1P02708 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.95■□□□□ 0.46
CHRNA1P02708 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA1P02708 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA1P02708 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CHRNA1P02708 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA1P02708 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA1P02708 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.95■□□□□ 0.46
CHRNA1P02708 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CHRNA1P02708 PCDHB18P-201ENST00000524813 2368 ntBASIC17.95■□□□□ 0.46
CHRNA1P02708 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CHRNA1P02708 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRNA1P02708 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA1P02708 GPAA1P2-202ENST00000606848 1787 ntBASIC17.95■□□□□ 0.46
CHRNA1P02708 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA1P02708 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA1P02708 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.95■□□□□ 0.46
CHRNA1P02708 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRNA1P02708 AP002490.2-201ENST00000524791 560 ntBASIC17.95■□□□□ 0.46
CHRNA1P02708 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.95■□□□□ 0.46
CHRNA1P02708 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.95■□□□□ 0.46
CHRNA1P02708 AL132655.2-201ENST00000596276 594 ntBASIC17.95■□□□□ 0.46
CHRNA1P02708 AC020765.3-201ENST00000613051 740 ntBASIC17.95■□□□□ 0.46
CHRNA1P02708 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CHRNA1P02708 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA1P02708 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA1P02708 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA1P02708 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CHRNA1P02708 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA1P02708 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRNA1P02708 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA1P02708 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.95■□□□□ 0.46
CHRNA1P02708 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA1P02708 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA1P02708 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CHRNA1P02708 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CHRNA1P02708 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA1P02708 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA1P02708 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA1P02708 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.94■□□□□ 0.46
CHRNA1P02708 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA1P02708 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA1P02708 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA1P02708 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA1P02708 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA1P02708 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CHRNA1P02708 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA1P02708 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA1P02708 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA1P02708 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA1P02708 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.94■□□□□ 0.46
CHRNA1P02708 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.94■□□□□ 0.46
CHRNA1P02708 AL353779.1-201ENST00000434793 351 ntBASIC17.94■□□□□ 0.46
CHRNA1P02708 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.94■□□□□ 0.46
CHRNA1P02708 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA1P02708 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA1P02708 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.94■□□□□ 0.46
CHRNA1P02708 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.94■□□□□ 0.46
CHRNA1P02708 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
CHRNA1P02708 AC010336.2-201ENST00000564226 506 ntBASIC17.94■□□□□ 0.46
CHRNA1P02708 AC004790.1-201ENST00000612686 536 ntBASIC17.94■□□□□ 0.46
CHRNA1P02708 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.94■□□□□ 0.46
CHRNA1P02708 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.94■□□□□ 0.46
CHRNA1P02708 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.94■□□□□ 0.46
CHRNA1P02708 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA1P02708 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA1P02708 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CHRNA1P02708 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA1P02708 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA1P02708 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA1P02708 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CHRNA1P02708 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA1P02708 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CHRNA1P02708 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.93■□□□□ 0.46
CHRNA1P02708 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.93■□□□□ 0.46
CHRNA1P02708 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms