Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.41■□□□□ 0.38
TRUB2O95900 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TRUB2O95900 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 MIR3909-201ENST00000579518 119 ntBASIC17.41■□□□□ 0.38
TRUB2O95900 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.41■□□□□ 0.38
TRUB2O95900 AC010327.4-202ENST00000591484 748 ntBASIC17.41■□□□□ 0.38
TRUB2O95900 AL078644.1-201ENST00000609881 752 ntBASIC17.41■□□□□ 0.38
TRUB2O95900 AC023511.2-201ENST00000618803 211 ntBASIC17.41■□□□□ 0.38
TRUB2O95900 AC091812.2-201ENST00000619081 385 ntBASIC17.41■□□□□ 0.38
TRUB2O95900 C20orf181-201ENST00000623918 480 ntBASIC17.41■□□□□ 0.38
TRUB2O95900 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.41■□□□□ 0.38
TRUB2O95900 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.41■□□□□ 0.38
TRUB2O95900 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
TRUB2O95900 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.41■□□□□ 0.38
TRUB2O95900 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
TRUB2O95900 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRUB2O95900 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.4■□□□□ 0.38
TRUB2O95900 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TRUB2O95900 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.4■□□□□ 0.38
TRUB2O95900 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.4■□□□□ 0.38
TRUB2O95900 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
TRUB2O95900 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRUB2O95900 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRUB2O95900 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.4■□□□□ 0.38
TRUB2O95900 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRUB2O95900 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRUB2O95900 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRUB2O95900 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.4■□□□□ 0.38
TRUB2O95900 PMS2P4-201ENST00000412466 1052 ntBASIC17.4■□□□□ 0.38
TRUB2O95900 GPX1P2-201ENST00000429271 606 ntBASIC17.4■□□□□ 0.38
TRUB2O95900 FAM58CP-201ENST00000435741 640 ntBASIC17.4■□□□□ 0.38
TRUB2O95900 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.4■□□□□ 0.38
TRUB2O95900 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.4■□□□□ 0.38
TRUB2O95900 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRUB2O95900 ALG1L5P-201ENST00000482043 771 ntBASIC17.4■□□□□ 0.38
TRUB2O95900 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.4■□□□□ 0.38
TRUB2O95900 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.4■□□□□ 0.38
TRUB2O95900 AC112191.1-201ENST00000523689 701 ntBASIC17.4■□□□□ 0.38
TRUB2O95900 AC109635.5-201ENST00000533593 962 ntBASIC17.4■□□□□ 0.38
TRUB2O95900 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.4■□□□□ 0.38
TRUB2O95900 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRUB2O95900 PCDH8P1-201ENST00000428983 2773 ntBASIC17.4■□□□□ 0.38
TRUB2O95900 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRUB2O95900 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRUB2O95900 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRUB2O95900 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRUB2O95900 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRUB2O95900 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRUB2O95900 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.39■□□□□ 0.38
TRUB2O95900 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRUB2O95900 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRUB2O95900 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRUB2O95900 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRUB2O95900 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.39■□□□□ 0.37
TRUB2O95900 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
TRUB2O95900 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRUB2O95900 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRUB2O95900 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRUB2O95900 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TRUB2O95900 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
TRUB2O95900 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TRUB2O95900 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRUB2O95900 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TRUB2O95900 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.39■□□□□ 0.37
TRUB2O95900 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRUB2O95900 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.39■□□□□ 0.37
TRUB2O95900 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRUB2O95900 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRUB2O95900 AC002056.1-201ENST00000395613 760 ntBASIC17.39■□□□□ 0.37
TRUB2O95900 RPSAP43-201ENST00000402237 625 ntBASIC17.39■□□□□ 0.37
TRUB2O95900 UPF3AP3-201ENST00000420996 769 ntBASIC17.39■□□□□ 0.37
TRUB2O95900 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.39■□□□□ 0.37
TRUB2O95900 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.39■□□□□ 0.37
TRUB2O95900 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRUB2O95900 AC112482.1-201ENST00000492080 688 ntBASIC17.39■□□□□ 0.37
TRUB2O95900 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRUB2O95900 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.39■□□□□ 0.37
TRUB2O95900 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.39■□□□□ 0.37
TRUB2O95900 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.39■□□□□ 0.37
TRUB2O95900 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms