Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.9■□□□□ 0.78
SEMA3EO15041 AL138828.2-201ENST00000615812 383 ntBASIC19.9■□□□□ 0.78
SEMA3EO15041 AL590560.3-201ENST00000623350 461 ntBASIC19.9■□□□□ 0.78
SEMA3EO15041 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.9■□□□□ 0.78
SEMA3EO15041 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA3EO15041 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA3EO15041 AC100757.3-201ENST00000622361 1406 ntBASIC19.9■□□□□ 0.78
SEMA3EO15041 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA3EO15041 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
SEMA3EO15041 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA3EO15041 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA3EO15041 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SEMA3EO15041 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SEMA3EO15041 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA3EO15041 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA3EO15041 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SEMA3EO15041 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.9■□□□□ 0.78
SEMA3EO15041 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.9■□□□□ 0.78
SEMA3EO15041 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
SEMA3EO15041 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
SEMA3EO15041 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
SEMA3EO15041 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SEMA3EO15041 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA3EO15041 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA3EO15041 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA3EO15041 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA3EO15041 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA3EO15041 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA3EO15041 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SEMA3EO15041 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SEMA3EO15041 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA3EO15041 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.89■□□□□ 0.77
SEMA3EO15041 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.89■□□□□ 0.77
SEMA3EO15041 FAM207CP-201ENST00000443486 507 ntBASIC19.89■□□□□ 0.77
SEMA3EO15041 GGT3P-204ENST00000453783 1664 ntBASIC19.89■□□□□ 0.77
SEMA3EO15041 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.89■□□□□ 0.77
SEMA3EO15041 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.89■□□□□ 0.77
SEMA3EO15041 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.89■□□□□ 0.77
SEMA3EO15041 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.89■□□□□ 0.77
SEMA3EO15041 AC105021.1-202ENST00000570572 669 ntBASIC19.89■□□□□ 0.77
SEMA3EO15041 AC061975.2-201ENST00000581722 295 ntBASIC19.89■□□□□ 0.77
SEMA3EO15041 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA3EO15041 RN7SL828P-201ENST00000607615 303 ntBASIC19.89■□□□□ 0.77
SEMA3EO15041 PCGF3-213ENST00000620529 1899 ntBASIC19.89■□□□□ 0.77
SEMA3EO15041 LINC01144-201ENST00000626198 1710 ntBASIC19.89■□□□□ 0.77
SEMA3EO15041 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA3EO15041 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA3EO15041 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEMA3EO15041 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA3EO15041 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA3EO15041 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA3EO15041 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SEMA3EO15041 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.88■□□□□ 0.77
SEMA3EO15041 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.88■□□□□ 0.77
SEMA3EO15041 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.88■□□□□ 0.77
SEMA3EO15041 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.88■□□□□ 0.77
SEMA3EO15041 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SEMA3EO15041 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SEMA3EO15041 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA3EO15041 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.88■□□□□ 0.77
SEMA3EO15041 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.88■□□□□ 0.77
SEMA3EO15041 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA3EO15041 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA3EO15041 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.88■□□□□ 0.77
SEMA3EO15041 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.88■□□□□ 0.77
SEMA3EO15041 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA3EO15041 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.88■□□□□ 0.77
SEMA3EO15041 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.88■□□□□ 0.77
SEMA3EO15041 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA3EO15041 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.88■□□□□ 0.77
SEMA3EO15041 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.88■□□□□ 0.77
SEMA3EO15041 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA3EO15041 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.88■□□□□ 0.77
SEMA3EO15041 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.88■□□□□ 0.77
SEMA3EO15041 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA3EO15041 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA3EO15041 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEMA3EO15041 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SEMA3EO15041 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.88■□□□□ 0.77
SEMA3EO15041 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA3EO15041 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SEMA3EO15041 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA3EO15041 CETN4P-206ENST00000642099 2168 ntBASIC19.87■□□□□ 0.77
SEMA3EO15041 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA3EO15041 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SEMA3EO15041 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA3EO15041 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA3EO15041 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.87■□□□□ 0.77
SEMA3EO15041 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.87■□□□□ 0.77
SEMA3EO15041 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.87■□□□□ 0.77
SEMA3EO15041 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
SEMA3EO15041 TSPY16P-201ENST00000449843 468 ntBASIC19.87■□□□□ 0.77
SEMA3EO15041 UGT1A2P-201ENST00000454886 866 ntBASIC19.87■□□□□ 0.77
SEMA3EO15041 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SEMA3EO15041 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.87■□□□□ 0.77
SEMA3EO15041 AL133215.2-201ENST00000609242 977 ntBASIC19.87■□□□□ 0.77
SEMA3EO15041 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.87■□□□□ 0.77
SEMA3EO15041 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA3EO15041 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA3EO15041 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms