Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC26.33■■□□□ 1.81
CHD1O14646 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHD1O14646 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
CHD1O14646 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHD1O14646 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
CHD1O14646 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
CHD1O14646 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC26.33■■□□□ 1.8
CHD1O14646 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHD1O14646 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
CHD1O14646 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CHD1O14646 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC26.32■■□□□ 1.8
CHD1O14646 AHRR-211ENST00000515206 462 ntTSL 5 BASIC26.32■■□□□ 1.8
CHD1O14646 AL096828.3-201ENST00000615354 462 ntBASIC26.32■■□□□ 1.8
CHD1O14646 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC26.32■■□□□ 1.8
CHD1O14646 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHD1O14646 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC26.32■■□□□ 1.8
CHD1O14646 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CHD1O14646 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC26.32■■□□□ 1.8
CHD1O14646 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CHD1O14646 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC26.32■■□□□ 1.8
CHD1O14646 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHD1O14646 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
CHD1O14646 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC26.31■■□□□ 1.8
CHD1O14646 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CHD1O14646 MPV17-204ENST00000399052 749 ntTSL 4 BASIC26.31■■□□□ 1.8
CHD1O14646 C1QBPP1-201ENST00000400117 770 ntBASIC26.31■■□□□ 1.8
CHD1O14646 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC26.31■■□□□ 1.8
CHD1O14646 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC26.31■■□□□ 1.8
CHD1O14646 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC26.31■■□□□ 1.8
CHD1O14646 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
CHD1O14646 MIR4741-201ENST00000579822 90 ntBASIC26.31■■□□□ 1.8
CHD1O14646 NDUFV2P1-201ENST00000596415 907 ntBASIC26.31■■□□□ 1.8
CHD1O14646 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC26.31■■□□□ 1.8
CHD1O14646 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHD1O14646 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC26.31■■□□□ 1.8
CHD1O14646 USE1-206ENST00000595101 1776 ntTSL 2 BASIC26.31■■□□□ 1.8
CHD1O14646 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
CHD1O14646 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC26.31■■□□□ 1.8
CHD1O14646 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
CHD1O14646 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
CHD1O14646 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHD1O14646 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
CHD1O14646 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CHD1O14646 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC26.31■■□□□ 1.8
CHD1O14646 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC26.31■■□□□ 1.8
CHD1O14646 AC093433.1-201ENST00000458048 571 ntBASIC26.31■■□□□ 1.8
CHD1O14646 VDAC1P7-201ENST00000462417 847 ntBASIC26.31■■□□□ 1.8
CHD1O14646 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC26.31■■□□□ 1.8
CHD1O14646 SDHD-202ENST00000525291 790 ntTSL 3 BASIC26.31■■□□□ 1.8
CHD1O14646 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC26.31■■□□□ 1.8
CHD1O14646 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CHD1O14646 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHD1O14646 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CHD1O14646 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
CHD1O14646 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHD1O14646 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC26.3■■□□□ 1.8
CHD1O14646 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC26.3■■□□□ 1.8
CHD1O14646 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC26.3■■□□□ 1.8
CHD1O14646 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC26.3■■□□□ 1.8
CHD1O14646 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CHD1O14646 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHD1O14646 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHD1O14646 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHD1O14646 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC26.29■■□□□ 1.8
CHD1O14646 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHD1O14646 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHD1O14646 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHD1O14646 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHD1O14646 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHD1O14646 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHD1O14646 AC074338.1-201ENST00000416825 156 ntBASIC26.29■■□□□ 1.8
CHD1O14646 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC26.29■■□□□ 1.8
CHD1O14646 APOA2-204ENST00000464492 530 ntTSL 3 BASIC26.29■■□□□ 1.8
CHD1O14646 RPSAP36-202ENST00000494591 1261 ntBASIC26.29■■□□□ 1.8
CHD1O14646 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC26.29■■□□□ 1.8
CHD1O14646 AC124947.2-201ENST00000547118 1133 ntBASIC26.29■■□□□ 1.8
CHD1O14646 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHD1O14646 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC26.29■■□□□ 1.8
CHD1O14646 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC26.29■■□□□ 1.8
CHD1O14646 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHD1O14646 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
CHD1O14646 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
CHD1O14646 AHCYP2-201ENST00000430630 1300 ntBASIC26.29■■□□□ 1.8
CHD1O14646 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHD1O14646 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHD1O14646 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC26.28■■□□□ 1.8
CHD1O14646 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHD1O14646 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHD1O14646 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC26.28■■□□□ 1.8
CHD1O14646 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC26.28■■□□□ 1.8
CHD1O14646 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC26.28■■□□□ 1.8
CHD1O14646 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC26.28■■□□□ 1.8
CHD1O14646 RN7SL769P-201ENST00000469386 295 ntBASIC26.28■■□□□ 1.8
CHD1O14646 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHD1O14646 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC26.28■■□□□ 1.8
CHD1O14646 AC025279.2-201ENST00000569730 653 ntBASIC26.28■■□□□ 1.8
CHD1O14646 AC073130.3-201ENST00000624389 2278 ntBASIC26.28■■□□□ 1.8
CHD1O14646 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHD1O14646 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHD1O14646 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms