Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Gm7063-201ENSMUST00000186840 981 ntBASIC13.05□□□□□ -0.32
Sh3yl1O08641 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Gm20445-201ENSMUST00000061905 565 ntBASIC13.05□□□□□ -0.32
Sh3yl1O08641 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3yl1O08641 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3yl1O08641 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3yl1O08641 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3yl1O08641 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.04□□□□□ -0.32
Sh3yl1O08641 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.04□□□□□ -0.32
Sh3yl1O08641 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.04□□□□□ -0.32
Sh3yl1O08641 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Sh3yl1O08641 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Sh3yl1O08641 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Gm6218-201ENSMUST00000219812 628 ntBASIC13.04□□□□□ -0.32
Sh3yl1O08641 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3yl1O08641 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3yl1O08641 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3yl1O08641 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3yl1O08641 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3yl1O08641 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3yl1O08641 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3yl1O08641 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3yl1O08641 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3yl1O08641 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3yl1O08641 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3yl1O08641 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.03□□□□□ -0.32
Sh3yl1O08641 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3yl1O08641 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3yl1O08641 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3yl1O08641 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3yl1O08641 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.03□□□□□ -0.32
Sh3yl1O08641 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.03□□□□□ -0.32
Sh3yl1O08641 Gm24694-201ENSMUST00000180054 110 ntBASIC13.03□□□□□ -0.32
Sh3yl1O08641 Gm27663-201ENSMUST00000184839 110 ntBASIC13.03□□□□□ -0.32
Sh3yl1O08641 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3yl1O08641 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.03□□□□□ -0.32
Sh3yl1O08641 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3yl1O08641 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.03□□□□□ -0.32
Sh3yl1O08641 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3yl1O08641 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3yl1O08641 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3yl1O08641 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3yl1O08641 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sh3yl1O08641 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Sh3yl1O08641 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3yl1O08641 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.03□□□□□ -0.32
Sh3yl1O08641 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3yl1O08641 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3yl1O08641 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms