Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM6-TRIM34B2RNG4 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.4■□□□□ 0.86
TRIM6-TRIM34B2RNG4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.4■□□□□ 0.86
TRIM6-TRIM34B2RNG4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM6-TRIM34B2RNG4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
TRIM6-TRIM34B2RNG4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM6-TRIM34B2RNG4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC20.39■□□□□ 0.86
TRIM6-TRIM34B2RNG4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM6-TRIM34B2RNG4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20.39■□□□□ 0.86
TRIM6-TRIM34B2RNG4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM6-TRIM34B2RNG4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM6-TRIM34B2RNG4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 IL9RP2-201ENST00000423948 1312 ntBASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 AL513480.1-201ENST00000451731 511 ntBASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM6-TRIM34B2RNG4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM6-TRIM34B2RNG4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM6-TRIM34B2RNG4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TRIM6-TRIM34B2RNG4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TRIM6-TRIM34B2RNG4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM6-TRIM34B2RNG4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TRIM6-TRIM34B2RNG4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM6-TRIM34B2RNG4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM6-TRIM34B2RNG4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM6-TRIM34B2RNG4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TRIM6-TRIM34B2RNG4 AL031731.1-201ENST00000642131 2094 ntBASIC20.38■□□□□ 0.85
TRIM6-TRIM34B2RNG4 IGLL3P-201ENST00000412472 434 ntBASIC20.38■□□□□ 0.85
TRIM6-TRIM34B2RNG4 AL590627.1-203ENST00000421194 1026 ntBASIC20.38■□□□□ 0.85
TRIM6-TRIM34B2RNG4 RPL13AP23-201ENST00000480739 586 ntBASIC20.38■□□□□ 0.85
TRIM6-TRIM34B2RNG4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM6-TRIM34B2RNG4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.38■□□□□ 0.85
TRIM6-TRIM34B2RNG4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM6-TRIM34B2RNG4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
TRIM6-TRIM34B2RNG4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM6-TRIM34B2RNG4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TRIM6-TRIM34B2RNG4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM6-TRIM34B2RNG4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM6-TRIM34B2RNG4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TRIM6-TRIM34B2RNG4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM6-TRIM34B2RNG4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM6-TRIM34B2RNG4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 HCG4B-203ENST00000450128 991 ntBASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
TRIM6-TRIM34B2RNG4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms