Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC25.82■■□□□ 1.72
RIMBP3Q9UFD9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
RIMBP3Q9UFD9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC25.82■■□□□ 1.72
RIMBP3Q9UFD9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
RIMBP3Q9UFD9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC25.82■■□□□ 1.72
RIMBP3Q9UFD9 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
RIMBP3Q9UFD9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RIMBP3Q9UFD9 AC005332.7-201ENST00000614046 2005 ntBASIC25.82■■□□□ 1.72
RIMBP3Q9UFD9 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RIMBP3Q9UFD9 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC25.82■■□□□ 1.72
RIMBP3Q9UFD9 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC25.82■■□□□ 1.72
RIMBP3Q9UFD9 MSRA-203ENST00000441698 788 ntTSL 2 BASIC25.82■■□□□ 1.72
RIMBP3Q9UFD9 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC25.82■■□□□ 1.72
RIMBP3Q9UFD9 AC234782.1-201ENST00000451950 919 ntBASIC25.82■■□□□ 1.72
RIMBP3Q9UFD9 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RIMBP3Q9UFD9 AC024681.1-201ENST00000521917 487 ntBASIC25.82■■□□□ 1.72
RIMBP3Q9UFD9 AC091544.8-201ENST00000619490 361 ntBASIC25.82■■□□□ 1.72
RIMBP3Q9UFD9 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
RIMBP3Q9UFD9 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC25.82■■□□□ 1.72
RIMBP3Q9UFD9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RIMBP3Q9UFD9 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
RIMBP3Q9UFD9 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
RIMBP3Q9UFD9 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RIMBP3Q9UFD9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC25.82■■□□□ 1.72
RIMBP3Q9UFD9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
RIMBP3Q9UFD9 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 AC097065.1-201ENST00000425737 517 ntBASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 SERPINA13P-202ENST00000478994 924 ntBASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 RERG-209ENST00000546331 1383 ntTSL 2 BASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 AL021920.2-201ENST00000624828 1351 ntBASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 ACTG1P2-201ENST00000415776 1125 ntBASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 ACTG1P11-201ENST00000425411 1125 ntBASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 AC022217.1-201ENST00000521069 738 ntBASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RIMBP3Q9UFD9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RIMBP3Q9UFD9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RIMBP3Q9UFD9 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RIMBP3Q9UFD9 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC25.8■■□□□ 1.72
RIMBP3Q9UFD9 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RIMBP3Q9UFD9 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC25.8■■□□□ 1.72
RIMBP3Q9UFD9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RIMBP3Q9UFD9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC25.8■■□□□ 1.72
RIMBP3Q9UFD9 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RIMBP3Q9UFD9 VMO1-203ENST00000416307 712 ntTSL 2 BASIC25.8■■□□□ 1.72
RIMBP3Q9UFD9 CNN2P10-201ENST00000443067 918 ntBASIC25.8■■□□□ 1.72
RIMBP3Q9UFD9 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
RIMBP3Q9UFD9 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RIMBP3Q9UFD9 AP001527.2-201ENST00000614441 631 ntBASIC25.8■■□□□ 1.72
RIMBP3Q9UFD9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
RIMBP3Q9UFD9 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC25.8■■□□□ 1.72
RIMBP3Q9UFD9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RIMBP3Q9UFD9 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RIMBP3Q9UFD9 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC25.79■■□□□ 1.72
RIMBP3Q9UFD9 CYP4F24P-201ENST00000586049 1580 ntBASIC25.79■■□□□ 1.72
RIMBP3Q9UFD9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RIMBP3Q9UFD9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC25.79■■□□□ 1.72
RIMBP3Q9UFD9 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RIMBP3Q9UFD9 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
RIMBP3Q9UFD9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC25.79■■□□□ 1.72
RIMBP3Q9UFD9 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RIMBP3Q9UFD9 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
RIMBP3Q9UFD9 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC25.79■■□□□ 1.72
RIMBP3Q9UFD9 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RIMBP3Q9UFD9 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
RIMBP3Q9UFD9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RIMBP3Q9UFD9 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
RIMBP3Q9UFD9 PCDHAC2-203ENST00000615316 3011 ntBASIC25.79■■□□□ 1.72
RIMBP3Q9UFD9 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC25.79■■□□□ 1.72
RIMBP3Q9UFD9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
RIMBP3Q9UFD9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
RIMBP3Q9UFD9 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RIMBP3Q9UFD9 CYP51A1P3-201ENST00000400072 1428 ntBASIC25.79■■□□□ 1.72
RIMBP3Q9UFD9 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.78■■□□□ 1.72
RIMBP3Q9UFD9 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC25.78■■□□□ 1.72
RIMBP3Q9UFD9 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RIMBP3Q9UFD9 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RIMBP3Q9UFD9 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RIMBP3Q9UFD9 FGFR3P1-201ENST00000449999 601 ntBASIC25.78■■□□□ 1.72
RIMBP3Q9UFD9 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC25.78■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms