Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 RPS2P1-201ENST00000434010 821 ntBASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXP3Q9BZS1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 AC008741.2-201ENST00000612792 3115 ntBASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 AC097637.2-201ENST00000624096 1997 ntBASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 RPS2P28-201ENST00000314255 741 ntBASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 ABCD1P5-201ENST00000445663 754 ntBASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 ZNF259P1-201ENST00000407656 1365 ntBASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 AC008894.3-201ENST00000624324 3103 ntBASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FOXP3Q9BZS1 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 PMS2P7-201ENST00000506558 1336 ntBASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 LINC00982-205ENST00000420957 435 ntBASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms