Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 AC140912.1-201ENST00000577171 1054 ntBASIC17.61■□□□□ 0.41
CASD1Q96PB1 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
CASD1Q96PB1 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CASD1Q96PB1 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CASD1Q96PB1 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CASD1Q96PB1 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.61■□□□□ 0.41
CASD1Q96PB1 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CASD1Q96PB1 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CASD1Q96PB1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CASD1Q96PB1 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.61■□□□□ 0.41
CASD1Q96PB1 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.61■□□□□ 0.41
CASD1Q96PB1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CASD1Q96PB1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.61■□□□□ 0.41
CASD1Q96PB1 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CASD1Q96PB1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CASD1Q96PB1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASD1Q96PB1 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.6■□□□□ 0.41
CASD1Q96PB1 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CASD1Q96PB1 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CASD1Q96PB1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASD1Q96PB1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASD1Q96PB1 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CASD1Q96PB1 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CASD1Q96PB1 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASD1Q96PB1 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CASD1Q96PB1 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASD1Q96PB1 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.6■□□□□ 0.41
CASD1Q96PB1 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CASD1Q96PB1 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.6■□□□□ 0.41
CASD1Q96PB1 HLA-J-202ENST00000469281 1241 ntBASIC17.6■□□□□ 0.41
CASD1Q96PB1 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.6■□□□□ 0.41
CASD1Q96PB1 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.6■□□□□ 0.41
CASD1Q96PB1 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.6■□□□□ 0.41
CASD1Q96PB1 KRT8P12-202ENST00000472924 1397 ntBASIC17.6■□□□□ 0.41
CASD1Q96PB1 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASD1Q96PB1 GGT4P-201ENST00000623672 1708 ntBASIC17.6■□□□□ 0.41
CASD1Q96PB1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CASD1Q96PB1 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.6■□□□□ 0.41
CASD1Q96PB1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CASD1Q96PB1 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASD1Q96PB1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CASD1Q96PB1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASD1Q96PB1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.59■□□□□ 0.41
CASD1Q96PB1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.59■□□□□ 0.41
CASD1Q96PB1 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CASD1Q96PB1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
CASD1Q96PB1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASD1Q96PB1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CASD1Q96PB1 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASD1Q96PB1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CASD1Q96PB1 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.59■□□□□ 0.41
CASD1Q96PB1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.59■□□□□ 0.41
CASD1Q96PB1 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASD1Q96PB1 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASD1Q96PB1 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CASD1Q96PB1 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CASD1Q96PB1 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASD1Q96PB1 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CASD1Q96PB1 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.59■□□□□ 0.41
CASD1Q96PB1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASD1Q96PB1 SPDYE17-201ENST00000412399 783 ntBASIC17.59■□□□□ 0.41
CASD1Q96PB1 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CASD1Q96PB1 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.59■□□□□ 0.41
CASD1Q96PB1 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CASD1Q96PB1 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.59■□□□□ 0.41
CASD1Q96PB1 SPDYE18-201ENST00000510091 1050 ntBASIC17.59■□□□□ 0.41
CASD1Q96PB1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASD1Q96PB1 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.59■□□□□ 0.41
CASD1Q96PB1 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.59■□□□□ 0.41
CASD1Q96PB1 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.59■□□□□ 0.41
CASD1Q96PB1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASD1Q96PB1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CASD1Q96PB1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.59■□□□□ 0.41
CASD1Q96PB1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CASD1Q96PB1 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.58■□□□□ 0.41
CASD1Q96PB1 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
CASD1Q96PB1 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CASD1Q96PB1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CASD1Q96PB1 AC139713.2-201ENST00000641328 2723 ntBASIC17.58■□□□□ 0.41
CASD1Q96PB1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
CASD1Q96PB1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.58■□□□□ 0.41
CASD1Q96PB1 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.58■□□□□ 0.4
CASD1Q96PB1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.58■□□□□ 0.4
CASD1Q96PB1 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CASD1Q96PB1 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CASD1Q96PB1 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.58■□□□□ 0.4
CASD1Q96PB1 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CASD1Q96PB1 DFFBP1-201ENST00000433250 979 ntBASIC17.58■□□□□ 0.4
CASD1Q96PB1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.58■□□□□ 0.4
CASD1Q96PB1 KRT17P7-201ENST00000451704 1104 ntBASIC17.58■□□□□ 0.4
CASD1Q96PB1 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.58■□□□□ 0.4
CASD1Q96PB1 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.58■□□□□ 0.4
CASD1Q96PB1 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CASD1Q96PB1 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.58■□□□□ 0.4
CASD1Q96PB1 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CASD1Q96PB1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CASD1Q96PB1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CASD1Q96PB1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CASD1Q96PB1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CASD1Q96PB1 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms