Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRIM11Q96F44 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM11Q96F44 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM11Q96F44 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM11Q96F44 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM11Q96F44 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM11Q96F44 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM11Q96F44 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM11Q96F44 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.63■□□□□ 0.41
TRIM11Q96F44 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.63■□□□□ 0.41
TRIM11Q96F44 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRIM11Q96F44 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.63■□□□□ 0.41
TRIM11Q96F44 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM11Q96F44 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM11Q96F44 FAM215A-202ENST00000632077 792 ntBASIC17.63■□□□□ 0.41
TRIM11Q96F44 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRIM11Q96F44 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM11Q96F44 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM11Q96F44 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM11Q96F44 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM11Q96F44 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM11Q96F44 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM11Q96F44 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM11Q96F44 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM11Q96F44 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TRIM11Q96F44 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM11Q96F44 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM11Q96F44 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM11Q96F44 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM11Q96F44 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRIM11Q96F44 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM11Q96F44 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM11Q96F44 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
TRIM11Q96F44 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM11Q96F44 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM11Q96F44 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM11Q96F44 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM11Q96F44 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM11Q96F44 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM11Q96F44 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM11Q96F44 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRIM11Q96F44 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM11Q96F44 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM11Q96F44 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM11Q96F44 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM11Q96F44 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRIM11Q96F44 PRSS29P-201ENST00000440800 595 ntBASIC17.62■□□□□ 0.41
TRIM11Q96F44 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM11Q96F44 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM11Q96F44 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM11Q96F44 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM11Q96F44 AC012640.2-201ENST00000561606 901 ntBASIC17.62■□□□□ 0.41
TRIM11Q96F44 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM11Q96F44 AL773604.1-201ENST00000617417 272 ntBASIC17.62■□□□□ 0.41
TRIM11Q96F44 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRIM11Q96F44 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM11Q96F44 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM11Q96F44 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM11Q96F44 FER1L4-210ENST00000615531 5998 ntBASIC17.62■□□□□ 0.41
TRIM11Q96F44 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM11Q96F44 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM11Q96F44 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRIM11Q96F44 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM11Q96F44 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRIM11Q96F44 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM11Q96F44 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM11Q96F44 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM11Q96F44 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM11Q96F44 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM11Q96F44 AC005052.1-201ENST00000625181 2492 ntBASIC17.61■□□□□ 0.41
TRIM11Q96F44 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM11Q96F44 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM11Q96F44 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM11Q96F44 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM11Q96F44 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
TRIM11Q96F44 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM11Q96F44 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM11Q96F44 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM11Q96F44 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM11Q96F44 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM11Q96F44 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM11Q96F44 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TRIM11Q96F44 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
TRIM11Q96F44 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM11Q96F44 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM11Q96F44 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.61■□□□□ 0.41
TRIM11Q96F44 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.61■□□□□ 0.41
TRIM11Q96F44 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRIM11Q96F44 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM11Q96F44 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
TRIM11Q96F44 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM11Q96F44 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM11Q96F44 RN7SL510P-201ENST00000581311 263 ntBASIC17.61■□□□□ 0.41
TRIM11Q96F44 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.61■□□□□ 0.41
TRIM11Q96F44 AL691432.3-201ENST00000621860 400 ntBASIC17.61■□□□□ 0.41
TRIM11Q96F44 AC004790.2-201ENST00000623588 572 ntBASIC17.61■□□□□ 0.41
TRIM11Q96F44 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM11Q96F44 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM11Q96F44 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM11Q96F44 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms