Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.83□□□□□ -0.04
RFT1Q96AA3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.83□□□□□ -0.04
RFT1Q96AA3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RFT1Q96AA3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFT1Q96AA3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RFT1Q96AA3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFT1Q96AA3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.83□□□□□ -0.04
RFT1Q96AA3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
RFT1Q96AA3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.83□□□□□ -0.04
RFT1Q96AA3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFT1Q96AA3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RFT1Q96AA3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFT1Q96AA3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
RFT1Q96AA3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFT1Q96AA3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 AL391256.1-201ENST00000443260 1855 ntBASIC14.82□□□□□ -0.04
RFT1Q96AA3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFT1Q96AA3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFT1Q96AA3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFT1Q96AA3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFT1Q96AA3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RFT1Q96AA3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFT1Q96AA3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RFT1Q96AA3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFT1Q96AA3 AL135999.2-201ENST00000622438 1686 ntBASIC14.82□□□□□ -0.04
RFT1Q96AA3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFT1Q96AA3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFT1Q96AA3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RFT1Q96AA3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFT1Q96AA3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RFT1Q96AA3 VENTXP7-201ENST00000475503 772 ntBASIC14.82□□□□□ -0.04
RFT1Q96AA3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 AP002490.2-201ENST00000524791 560 ntBASIC14.82□□□□□ -0.04
RFT1Q96AA3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RFT1Q96AA3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 AP005901.3-202ENST00000581653 237 ntBASIC14.82□□□□□ -0.04
RFT1Q96AA3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 NTF6B-201ENST00000591913 560 ntBASIC14.82□□□□□ -0.04
RFT1Q96AA3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.82□□□□□ -0.04
RFT1Q96AA3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFT1Q96AA3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 AC005332.1-201ENST00000577698 1310 ntBASIC14.82□□□□□ -0.04
RFT1Q96AA3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RFT1Q96AA3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFT1Q96AA3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RFT1Q96AA3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFT1Q96AA3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFT1Q96AA3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFT1Q96AA3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFT1Q96AA3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.82□□□□□ -0.04
RFT1Q96AA3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFT1Q96AA3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RFT1Q96AA3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFT1Q96AA3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RFT1Q96AA3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFT1Q96AA3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
RFT1Q96AA3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFT1Q96AA3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RFT1Q96AA3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.81□□□□□ -0.04
RFT1Q96AA3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFT1Q96AA3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFT1Q96AA3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RFT1Q96AA3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFT1Q96AA3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RFT1Q96AA3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RFT1Q96AA3 AL031133.1-201ENST00000406807 723 ntBASIC14.81□□□□□ -0.04
RFT1Q96AA3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RFT1Q96AA3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.81□□□□□ -0.04
RFT1Q96AA3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.81□□□□□ -0.04
RFT1Q96AA3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RFT1Q96AA3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.81□□□□□ -0.04
RFT1Q96AA3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.81□□□□□ -0.04
RFT1Q96AA3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RFT1Q96AA3 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.81□□□□□ -0.04
RFT1Q96AA3 AL121672.3-201ENST00000608644 468 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms