Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SEMA4DQ92854 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SEMA4DQ92854 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.88■□□□□ 0.45
SEMA4DQ92854 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SEMA4DQ92854 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SEMA4DQ92854 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SEMA4DQ92854 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.88■□□□□ 0.45
SEMA4DQ92854 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SEMA4DQ92854 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.88■□□□□ 0.45
SEMA4DQ92854 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SEMA4DQ92854 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SEMA4DQ92854 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SEMA4DQ92854 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SEMA4DQ92854 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SEMA4DQ92854 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.88■□□□□ 0.45
SEMA4DQ92854 AC109635.5-201ENST00000533593 962 ntBASIC17.88■□□□□ 0.45
SEMA4DQ92854 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.88■□□□□ 0.45
SEMA4DQ92854 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
SEMA4DQ92854 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.88■□□□□ 0.45
SEMA4DQ92854 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SEMA4DQ92854 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.88■□□□□ 0.45
SEMA4DQ92854 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SEMA4DQ92854 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.88■□□□□ 0.45
SEMA4DQ92854 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.88■□□□□ 0.45
SEMA4DQ92854 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SEMA4DQ92854 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SEMA4DQ92854 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SEMA4DQ92854 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SEMA4DQ92854 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
SEMA4DQ92854 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SEMA4DQ92854 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SEMA4DQ92854 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.87■□□□□ 0.45
SEMA4DQ92854 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SEMA4DQ92854 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SEMA4DQ92854 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SEMA4DQ92854 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SEMA4DQ92854 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
SEMA4DQ92854 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SEMA4DQ92854 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SEMA4DQ92854 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SEMA4DQ92854 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SEMA4DQ92854 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.87■□□□□ 0.45
SEMA4DQ92854 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.87■□□□□ 0.45
SEMA4DQ92854 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.87■□□□□ 0.45
SEMA4DQ92854 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SEMA4DQ92854 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.87■□□□□ 0.45
SEMA4DQ92854 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.87■□□□□ 0.45
SEMA4DQ92854 AC068137.2-201ENST00000605408 478 ntBASIC17.87■□□□□ 0.45
SEMA4DQ92854 AC021097.1-201ENST00000607902 574 ntBASIC17.87■□□□□ 0.45
SEMA4DQ92854 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.87■□□□□ 0.45
SEMA4DQ92854 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SEMA4DQ92854 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
SEMA4DQ92854 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SEMA4DQ92854 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SEMA4DQ92854 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SEMA4DQ92854 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.87■□□□□ 0.45
SEMA4DQ92854 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SEMA4DQ92854 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SEMA4DQ92854 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SEMA4DQ92854 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.87■□□□□ 0.45
SEMA4DQ92854 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.86■□□□□ 0.45
SEMA4DQ92854 TNRC18P3-201ENST00000441896 2691 ntBASIC17.86■□□□□ 0.45
SEMA4DQ92854 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SEMA4DQ92854 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SEMA4DQ92854 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SEMA4DQ92854 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SEMA4DQ92854 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SEMA4DQ92854 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SEMA4DQ92854 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SEMA4DQ92854 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SEMA4DQ92854 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.86■□□□□ 0.45
SEMA4DQ92854 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SEMA4DQ92854 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.86■□□□□ 0.45
SEMA4DQ92854 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.86■□□□□ 0.45
SEMA4DQ92854 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SEMA4DQ92854 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SEMA4DQ92854 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.86■□□□□ 0.45
SEMA4DQ92854 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.86■□□□□ 0.45
SEMA4DQ92854 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.86■□□□□ 0.45
SEMA4DQ92854 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.86■□□□□ 0.45
SEMA4DQ92854 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SEMA4DQ92854 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SEMA4DQ92854 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SEMA4DQ92854 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.86■□□□□ 0.45
SEMA4DQ92854 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SEMA4DQ92854 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
SEMA4DQ92854 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SEMA4DQ92854 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
SEMA4DQ92854 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.86■□□□□ 0.45
SEMA4DQ92854 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SEMA4DQ92854 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SEMA4DQ92854 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.86■□□□□ 0.45
SEMA4DQ92854 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.86■□□□□ 0.45
SEMA4DQ92854 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.86■□□□□ 0.45
SEMA4DQ92854 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SEMA4DQ92854 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
SEMA4DQ92854 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SEMA4DQ92854 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.86■□□□□ 0.45
SEMA4DQ92854 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SEMA4DQ92854 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms