Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RTL9Q8NET4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC20.37■□□□□ 0.85
RTL9Q8NET4 RNA5SP410-201ENST00000516285 106 ntBASIC20.37■□□□□ 0.85
RTL9Q8NET4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.37■□□□□ 0.85
RTL9Q8NET4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.37■□□□□ 0.85
RTL9Q8NET4 AC025048.6-201ENST00000634326 1161 ntBASIC20.37■□□□□ 0.85
RTL9Q8NET4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTL9Q8NET4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTL9Q8NET4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTL9Q8NET4 AL645608.8-201ENST00000606034 2086 ntBASIC20.37■□□□□ 0.85
RTL9Q8NET4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.37■□□□□ 0.85
RTL9Q8NET4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RTL9Q8NET4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RTL9Q8NET4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
RTL9Q8NET4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RTL9Q8NET4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTL9Q8NET4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.36■□□□□ 0.85
RTL9Q8NET4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTL9Q8NET4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RTL9Q8NET4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RTL9Q8NET4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
RTL9Q8NET4 AC007274.1-201ENST00000439805 662 ntBASIC20.36■□□□□ 0.85
RTL9Q8NET4 TMPRSS11CP-201ENST00000453277 683 ntBASIC20.36■□□□□ 0.85
RTL9Q8NET4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RTL9Q8NET4 ZNF890P-202ENST00000530367 1156 ntBASIC20.36■□□□□ 0.85
RTL9Q8NET4 MAX-210ENST00000555419 765 ntTSL 5 BASIC20.36■□□□□ 0.85
RTL9Q8NET4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.36■□□□□ 0.85
RTL9Q8NET4 AC105021.1-202ENST00000570572 669 ntBASIC20.36■□□□□ 0.85
RTL9Q8NET4 AC061975.2-201ENST00000581722 295 ntBASIC20.36■□□□□ 0.85
RTL9Q8NET4 RN7SL828P-201ENST00000607615 303 ntBASIC20.36■□□□□ 0.85
RTL9Q8NET4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.36■□□□□ 0.85
RTL9Q8NET4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTL9Q8NET4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTL9Q8NET4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RTL9Q8NET4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
RTL9Q8NET4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.36■□□□□ 0.85
RTL9Q8NET4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RTL9Q8NET4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC20.36■□□□□ 0.85
RTL9Q8NET4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
RTL9Q8NET4 CETN4P-206ENST00000642099 2168 ntBASIC20.36■□□□□ 0.85
RTL9Q8NET4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTL9Q8NET4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RTL9Q8NET4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTL9Q8NET4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RTL9Q8NET4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RTL9Q8NET4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.35■□□□□ 0.85
RTL9Q8NET4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTL9Q8NET4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RTL9Q8NET4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTL9Q8NET4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTL9Q8NET4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC20.35■□□□□ 0.85
RTL9Q8NET4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.35■□□□□ 0.85
RTL9Q8NET4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC20.35■□□□□ 0.85
RTL9Q8NET4 AL662799.1-202ENST00000614205 422 ntBASIC20.35■□□□□ 0.85
RTL9Q8NET4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RTL9Q8NET4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.35■□□□□ 0.85
RTL9Q8NET4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.35■□□□□ 0.85
RTL9Q8NET4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RTL9Q8NET4 AL589702.1-201ENST00000641229 1509 ntBASIC20.35■□□□□ 0.85
RTL9Q8NET4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTL9Q8NET4 AC006538.1-201ENST00000567905 1585 ntBASIC20.35■□□□□ 0.85
RTL9Q8NET4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTL9Q8NET4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTL9Q8NET4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RTL9Q8NET4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC20.35■□□□□ 0.85
RTL9Q8NET4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTL9Q8NET4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTL9Q8NET4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTL9Q8NET4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTL9Q8NET4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.35■□□□□ 0.85
RTL9Q8NET4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RTL9Q8NET4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RTL9Q8NET4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RTL9Q8NET4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
RTL9Q8NET4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.34■□□□□ 0.85
RTL9Q8NET4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.34■□□□□ 0.85
RTL9Q8NET4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
RTL9Q8NET4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 RPL37AP1-201ENST00000412502 279 ntBASIC20.34■□□□□ 0.85
RTL9Q8NET4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC20.34■□□□□ 0.85
RTL9Q8NET4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC20.34■□□□□ 0.85
RTL9Q8NET4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RTL9Q8NET4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.34■□□□□ 0.85
RTL9Q8NET4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.34■□□□□ 0.85
RTL9Q8NET4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC20.34■□□□□ 0.85
RTL9Q8NET4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC20.34■□□□□ 0.85
RTL9Q8NET4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
RTL9Q8NET4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC20.34■□□□□ 0.85
RTL9Q8NET4 AC087499.5-201ENST00000452760 1342 ntBASIC20.34■□□□□ 0.85
RTL9Q8NET4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.34■□□□□ 0.85
RTL9Q8NET4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.34■□□□□ 0.85
RTL9Q8NET4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RTL9Q8NET4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTL9Q8NET4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms