Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 AC104989.1-201ENST00000519711 778 ntBASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 AMT-206ENST00000458307 1860 ntTSL 2 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 RAD18-204ENST00000418463 563 ntTSL 4 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 RAD18-205ENST00000421052 582 ntTSL 3 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 AP001350.2-201ENST00000625104 1094 ntBASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 MIR5189-201ENST00000577370 114 ntBASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 AL021578.1-201ENST00000613646 709 ntBASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 RNA5SP412-201ENST00000516234 123 ntBASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 AC123567.1-201ENST00000548294 1261 ntBASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 VMO1-203ENST00000416307 712 ntTSL 2 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 AC098859.1-201ENST00000502915 1238 ntBASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 SLC25A47P1-201ENST00000531577 414 ntBASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 BTNL10-201ENST00000595971 695 ntBASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms