Protein–RNA interactions for Protein: Q5VT98

PRAMEF20, PRAME family member 20, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF20Q5VT98 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 AL603756.1-201ENST00000606511 2163 ntBASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 RN7SL589P-201ENST00000481268 310 ntBASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 AC079140.1-201ENST00000508039 487 ntBASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 MIR3909-201ENST00000579518 119 ntBASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 AC004835.2-201ENST00000603762 682 ntBASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 AC027612.4-201ENST00000605371 583 ntBASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 WASH6P-202ENST00000359512 1437 ntBASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PRAMEF20Q5VT98 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 SNX33P1-201ENST00000592116 1762 ntBASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 METTL21AP1-201ENST00000438852 635 ntBASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 AC021097.1-201ENST00000607902 574 ntBASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.24■□□□□ 0.03
PRAMEF20Q5VT98 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms