Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LRRK2Q5S007 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.24□□□□□ -0.13
LRRK2Q5S007 AC005077.2-201ENST00000449786 690 ntBASIC14.24□□□□□ -0.13
LRRK2Q5S007 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LRRK2Q5S007 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.24□□□□□ -0.13
LRRK2Q5S007 ENPP7P5-201ENST00000541031 1031 ntBASIC14.24□□□□□ -0.13
LRRK2Q5S007 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.24□□□□□ -0.13
LRRK2Q5S007 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.24□□□□□ -0.13
LRRK2Q5S007 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LRRK2Q5S007 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.24□□□□□ -0.13
LRRK2Q5S007 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.24□□□□□ -0.13
LRRK2Q5S007 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRK2Q5S007 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRK2Q5S007 WIZP1-201ENST00000531444 2299 ntBASIC14.24□□□□□ -0.13
LRRK2Q5S007 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRK2Q5S007 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
LRRK2Q5S007 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRK2Q5S007 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LRRK2Q5S007 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRK2Q5S007 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LRRK2Q5S007 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.24□□□□□ -0.13
LRRK2Q5S007 AL442647.2-201ENST00000429864 857 ntBASIC14.24□□□□□ -0.13
LRRK2Q5S007 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.24□□□□□ -0.13
LRRK2Q5S007 AC104596.2-201ENST00000512793 793 ntBASIC14.24□□□□□ -0.13
LRRK2Q5S007 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.24□□□□□ -0.13
LRRK2Q5S007 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LRRK2Q5S007 NDUFV2P1-201ENST00000596415 907 ntBASIC14.24□□□□□ -0.13
LRRK2Q5S007 AC074044.1-201ENST00000609673 707 ntBASIC14.24□□□□□ -0.13
LRRK2Q5S007 AC244669.2-201ENST00000612320 853 ntBASIC14.24□□□□□ -0.13
LRRK2Q5S007 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LRRK2Q5S007 AL021920.2-201ENST00000624828 1351 ntBASIC14.24□□□□□ -0.13
LRRK2Q5S007 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LRRK2Q5S007 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.24□□□□□ -0.13
LRRK2Q5S007 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRK2Q5S007 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LRRK2Q5S007 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRK2Q5S007 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
LRRK2Q5S007 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRRK2Q5S007 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC14.23□□□□□ -0.13
LRRK2Q5S007 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRRK2Q5S007 AC026954.1-201ENST00000429771 1293 ntBASIC14.23□□□□□ -0.13
LRRK2Q5S007 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.23□□□□□ -0.13
LRRK2Q5S007 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
LRRK2Q5S007 AP001889.1-201ENST00000525414 633 ntBASIC14.23□□□□□ -0.13
LRRK2Q5S007 AC068587.3-201ENST00000526613 355 ntBASIC14.23□□□□□ -0.13
LRRK2Q5S007 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LRRK2Q5S007 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LRRK2Q5S007 AC020914.3-201ENST00000594712 304 ntBASIC14.23□□□□□ -0.13
LRRK2Q5S007 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRRK2Q5S007 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LRRK2Q5S007 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
LRRK2Q5S007 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRRK2Q5S007 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRRK2Q5S007 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.23□□□□□ -0.13
LRRK2Q5S007 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRRK2Q5S007 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LRRK2Q5S007 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LRRK2Q5S007 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRRK2Q5S007 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.23□□□□□ -0.13
LRRK2Q5S007 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRRK2Q5S007 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LRRK2Q5S007 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRRK2Q5S007 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LRRK2Q5S007 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.23□□□□□ -0.13
LRRK2Q5S007 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.23□□□□□ -0.13
LRRK2Q5S007 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.23□□□□□ -0.13
LRRK2Q5S007 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.23□□□□□ -0.13
LRRK2Q5S007 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LRRK2Q5S007 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRRK2Q5S007 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRRK2Q5S007 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LRRK2Q5S007 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRRK2Q5S007 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.23□□□□□ -0.13
LRRK2Q5S007 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRRK2Q5S007 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LRRK2Q5S007 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.23□□□□□ -0.13
LRRK2Q5S007 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
LRRK2Q5S007 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LRRK2Q5S007 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRRK2Q5S007 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
LRRK2Q5S007 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRK2Q5S007 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.22□□□□□ -0.13
LRRK2Q5S007 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRK2Q5S007 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRRK2Q5S007 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.22□□□□□ -0.13
LRRK2Q5S007 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.22□□□□□ -0.13
LRRK2Q5S007 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC14.22□□□□□ -0.13
LRRK2Q5S007 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LRRK2Q5S007 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRRK2Q5S007 ACTG1P3-201ENST00000431775 1114 ntBASIC14.22□□□□□ -0.13
LRRK2Q5S007 AC114501.1-201ENST00000445949 172 ntBASIC14.22□□□□□ -0.13
LRRK2Q5S007 AC104784.1-201ENST00000473096 294 ntBASIC14.22□□□□□ -0.13
LRRK2Q5S007 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.22□□□□□ -0.13
LRRK2Q5S007 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.22□□□□□ -0.13
LRRK2Q5S007 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.22□□□□□ -0.13
LRRK2Q5S007 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.22□□□□□ -0.13
LRRK2Q5S007 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
LRRK2Q5S007 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRRK2Q5S007 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRRK2Q5S007 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms