Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC16.59■□□□□ 0.25
NUBP1P53384 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.59■□□□□ 0.25
NUBP1P53384 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUBP1P53384 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.59■□□□□ 0.25
NUBP1P53384 MIR4492-201ENST00000581627 80 ntBASIC16.59■□□□□ 0.25
NUBP1P53384 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.59■□□□□ 0.25
NUBP1P53384 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUBP1P53384 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUBP1P53384 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
NUBP1P53384 AC104820.1-201ENST00000624183 307 ntBASIC16.59■□□□□ 0.25
NUBP1P53384 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.59■□□□□ 0.25
NUBP1P53384 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUBP1P53384 AC018665.1-201ENST00000622927 1362 ntBASIC16.59■□□□□ 0.25
NUBP1P53384 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUBP1P53384 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.59■□□□□ 0.25
NUBP1P53384 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NUBP1P53384 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUBP1P53384 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.59■□□□□ 0.25
NUBP1P53384 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUBP1P53384 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUBP1P53384 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
NUBP1P53384 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.59■□□□□ 0.25
NUBP1P53384 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NUBP1P53384 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NUBP1P53384 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.58■□□□□ 0.25
NUBP1P53384 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.58■□□□□ 0.25
NUBP1P53384 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.58■□□□□ 0.25
NUBP1P53384 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NUBP1P53384 AC126763.1-201ENST00000552015 2118 ntBASIC16.58■□□□□ 0.25
NUBP1P53384 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.58■□□□□ 0.25
NUBP1P53384 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
NUBP1P53384 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NUBP1P53384 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NUBP1P53384 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NUBP1P53384 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUBP1P53384 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NUBP1P53384 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.58■□□□□ 0.24
NUBP1P53384 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUBP1P53384 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.58■□□□□ 0.24
NUBP1P53384 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NUBP1P53384 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUBP1P53384 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.58■□□□□ 0.24
NUBP1P53384 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC16.58■□□□□ 0.24
NUBP1P53384 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
NUBP1P53384 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NUBP1P53384 CSF2RBP1-201ENST00000447905 391 ntBASIC16.58■□□□□ 0.24
NUBP1P53384 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUBP1P53384 UBE2V1P12-201ENST00000503954 474 ntBASIC16.58■□□□□ 0.24
NUBP1P53384 AC118465.1-201ENST00000513820 1271 ntBASIC16.58■□□□□ 0.24
NUBP1P53384 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.58■□□□□ 0.24
NUBP1P53384 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUBP1P53384 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
NUBP1P53384 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.58■□□□□ 0.24
NUBP1P53384 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC16.58■□□□□ 0.24
NUBP1P53384 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.58■□□□□ 0.24
NUBP1P53384 AL109741.3-201ENST00000561748 592 ntBASIC16.58■□□□□ 0.24
NUBP1P53384 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.58■□□□□ 0.24
NUBP1P53384 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NUBP1P53384 MPDU1-223ENST00000582151 728 ntBASIC16.58■□□□□ 0.24
NUBP1P53384 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.58■□□□□ 0.24
NUBP1P53384 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
NUBP1P53384 AL022328.1-201ENST00000610050 478 ntBASIC16.58■□□□□ 0.24
NUBP1P53384 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NUBP1P53384 LINC01451-201ENST00000623792 534 ntBASIC16.58■□□□□ 0.24
NUBP1P53384 AC004461.2-201ENST00000629517 803 ntBASIC16.58■□□□□ 0.24
NUBP1P53384 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUBP1P53384 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NUBP1P53384 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
NUBP1P53384 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NUBP1P53384 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
NUBP1P53384 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.58■□□□□ 0.24
NUBP1P53384 PDIA3P1-201ENST00000471856 1510 ntBASIC16.58■□□□□ 0.24
NUBP1P53384 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NUBP1P53384 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
NUBP1P53384 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
NUBP1P53384 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
NUBP1P53384 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
NUBP1P53384 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NUBP1P53384 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NUBP1P53384 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUBP1P53384 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUBP1P53384 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUBP1P53384 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.57■□□□□ 0.24
NUBP1P53384 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUBP1P53384 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUBP1P53384 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NUBP1P53384 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUBP1P53384 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUBP1P53384 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUBP1P53384 AL157902.2-201ENST00000623435 1492 ntBASIC16.57■□□□□ 0.24
NUBP1P53384 KRT8P12-202ENST00000472924 1397 ntBASIC16.57■□□□□ 0.24
NUBP1P53384 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUBP1P53384 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUBP1P53384 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUBP1P53384 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC16.57■□□□□ 0.24
NUBP1P53384 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NUBP1P53384 AC099336.1-201ENST00000417053 1171 ntBASIC16.57■□□□□ 0.24
NUBP1P53384 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUBP1P53384 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC16.57■□□□□ 0.24
NUBP1P53384 AL359839.1-201ENST00000451975 1160 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms