Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC18.34■□□□□ 0.53
BRCA2P51587 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.34■□□□□ 0.53
BRCA2P51587 AC020765.3-201ENST00000613051 740 ntBASIC18.34■□□□□ 0.53
BRCA2P51587 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.34■□□□□ 0.53
BRCA2P51587 AC128714.1-201ENST00000637035 887 ntBASIC18.34■□□□□ 0.53
BRCA2P51587 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
BRCA2P51587 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
BRCA2P51587 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRCA2P51587 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRCA2P51587 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.33■□□□□ 0.53
BRCA2P51587 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
BRCA2P51587 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRCA2P51587 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.33■□□□□ 0.53
BRCA2P51587 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.33■□□□□ 0.53
BRCA2P51587 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRCA2P51587 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
BRCA2P51587 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRCA2P51587 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
BRCA2P51587 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
BRCA2P51587 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
BRCA2P51587 EGFEM1P-202ENST00000431685 1563 ntBASIC18.33■□□□□ 0.53
BRCA2P51587 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
BRCA2P51587 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.33■□□□□ 0.53
BRCA2P51587 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRCA2P51587 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.33■□□□□ 0.52
BRCA2P51587 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.33■□□□□ 0.52
BRCA2P51587 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
BRCA2P51587 AL022328.1-201ENST00000610050 478 ntBASIC18.33■□□□□ 0.52
BRCA2P51587 AL133373.2-201ENST00000623187 2828 ntBASIC18.33■□□□□ 0.52
BRCA2P51587 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BRCA2P51587 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
BRCA2P51587 KRT8P19-201ENST00000551916 1455 ntBASIC18.33■□□□□ 0.52
BRCA2P51587 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
BRCA2P51587 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
BRCA2P51587 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
BRCA2P51587 GGCT-203ENST00000409144 836 ntTSL 2 BASIC18.33■□□□□ 0.52
BRCA2P51587 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BRCA2P51587 PCDHB17P-201ENST00000539533 2393 ntBASIC18.33■□□□□ 0.52
BRCA2P51587 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
BRCA2P51587 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.33■□□□□ 0.52
BRCA2P51587 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
BRCA2P51587 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRCA2P51587 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRCA2P51587 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRCA2P51587 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC18.32■□□□□ 0.52
BRCA2P51587 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.32■□□□□ 0.52
BRCA2P51587 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRCA2P51587 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
BRCA2P51587 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
BRCA2P51587 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRCA2P51587 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.32■□□□□ 0.52
BRCA2P51587 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.32■□□□□ 0.52
BRCA2P51587 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRCA2P51587 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
BRCA2P51587 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRCA2P51587 LBH-202ENST00000401506 485 ntTSL 3 BASIC18.32■□□□□ 0.52
BRCA2P51587 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC18.32■□□□□ 0.52
BRCA2P51587 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC18.32■□□□□ 0.52
BRCA2P51587 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.32■□□□□ 0.52
BRCA2P51587 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.32■□□□□ 0.52
BRCA2P51587 AC018470.1-201ENST00000624790 3129 ntBASIC18.32■□□□□ 0.52
BRCA2P51587 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
BRCA2P51587 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRCA2P51587 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
BRCA2P51587 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRCA2P51587 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRCA2P51587 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.32■□□□□ 0.52
BRCA2P51587 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRCA2P51587 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRCA2P51587 AC139713.2-201ENST00000641328 2723 ntBASIC18.31■□□□□ 0.52
BRCA2P51587 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC18.31■□□□□ 0.52
BRCA2P51587 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRCA2P51587 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
BRCA2P51587 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC18.31■□□□□ 0.52
BRCA2P51587 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.31■□□□□ 0.52
BRCA2P51587 AP001258.2-201ENST00000529891 490 ntBASIC18.31■□□□□ 0.52
BRCA2P51587 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC18.31■□□□□ 0.52
BRCA2P51587 MPDU1-223ENST00000582151 728 ntBASIC18.31■□□□□ 0.52
BRCA2P51587 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC18.31■□□□□ 0.52
BRCA2P51587 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
BRCA2P51587 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRCA2P51587 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
BRCA2P51587 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
BRCA2P51587 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRCA2P51587 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.31■□□□□ 0.52
BRCA2P51587 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.31■□□□□ 0.52
BRCA2P51587 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRCA2P51587 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRCA2P51587 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
BRCA2P51587 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRCA2P51587 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.31■□□□□ 0.52
BRCA2P51587 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRCA2P51587 AC012313.1-201ENST00000593393 3059 ntBASIC18.31■□□□□ 0.52
BRCA2P51587 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
BRCA2P51587 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRCA2P51587 LDHBP1-201ENST00000455730 1119 ntBASIC18.3■□□□□ 0.52
BRCA2P51587 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.3■□□□□ 0.52
BRCA2P51587 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.3■□□□□ 0.52
BRCA2P51587 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.3■□□□□ 0.52
BRCA2P51587 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms