Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RARBP10826 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.57■□□□□ 0.56
RARBP10826 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RARBP10826 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RARBP10826 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
RARBP10826 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.57■□□□□ 0.56
RARBP10826 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RARBP10826 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.57■□□□□ 0.56
RARBP10826 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.57■□□□□ 0.56
RARBP10826 RNA5SP410-201ENST00000516285 106 ntBASIC18.57■□□□□ 0.56
RARBP10826 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.57■□□□□ 0.56
RARBP10826 AC135586.1-201ENST00000539323 574 ntBASIC18.57■□□□□ 0.56
RARBP10826 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.57■□□□□ 0.56
RARBP10826 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RARBP10826 AC004840.1-201ENST00000636359 365 ntBASIC18.57■□□□□ 0.56
RARBP10826 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.57■□□□□ 0.56
RARBP10826 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RARBP10826 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RARBP10826 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.57■□□□□ 0.56
RARBP10826 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RARBP10826 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RARBP10826 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RARBP10826 AC116353.5-201ENST00000638148 1699 ntBASIC18.57■□□□□ 0.56
RARBP10826 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RARBP10826 AC108860.2-201ENST00000562760 2183 ntBASIC18.57■□□□□ 0.56
RARBP10826 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.56■□□□□ 0.56
RARBP10826 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.56■□□□□ 0.56
RARBP10826 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RARBP10826 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.56■□□□□ 0.56
RARBP10826 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RARBP10826 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RARBP10826 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RARBP10826 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RARBP10826 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RARBP10826 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.56■□□□□ 0.56
RARBP10826 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RARBP10826 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RARBP10826 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
RARBP10826 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RARBP10826 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.56■□□□□ 0.56
RARBP10826 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RARBP10826 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
RARBP10826 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.56■□□□□ 0.56
RARBP10826 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RARBP10826 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RARBP10826 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RARBP10826 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.56■□□□□ 0.56
RARBP10826 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.56■□□□□ 0.56
RARBP10826 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RARBP10826 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RARBP10826 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RARBP10826 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RARBP10826 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RARBP10826 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RARBP10826 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.55■□□□□ 0.56
RARBP10826 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RARBP10826 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RARBP10826 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RARBP10826 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RARBP10826 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RARBP10826 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RARBP10826 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RARBP10826 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.55■□□□□ 0.56
RARBP10826 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RARBP10826 BTBD7P1-201ENST00000447253 1453 ntBASIC18.55■□□□□ 0.56
RARBP10826 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RARBP10826 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RARBP10826 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RARBP10826 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RARBP10826 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.55■□□□□ 0.56
RARBP10826 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
RARBP10826 DFFBP1-201ENST00000433250 979 ntBASIC18.55■□□□□ 0.56
RARBP10826 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RARBP10826 GIMAP3P-201ENST00000495150 836 ntBASIC18.55■□□□□ 0.56
RARBP10826 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RARBP10826 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RARBP10826 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.55■□□□□ 0.56
RARBP10826 AL079307.3-201ENST00000556114 283 ntBASIC18.55■□□□□ 0.56
RARBP10826 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RARBP10826 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.55■□□□□ 0.56
RARBP10826 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.55■□□□□ 0.56
RARBP10826 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.55■□□□□ 0.56
RARBP10826 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RARBP10826 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.55■□□□□ 0.56
RARBP10826 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.55■□□□□ 0.56
RARBP10826 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RARBP10826 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RARBP10826 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RARBP10826 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.55■□□□□ 0.56
RARBP10826 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RARBP10826 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RARBP10826 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RARBP10826 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RARBP10826 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.54■□□□□ 0.56
RARBP10826 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.54■□□□□ 0.56
RARBP10826 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.54■□□□□ 0.56
RARBP10826 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RARBP10826 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RARBP10826 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RARBP10826 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms