Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 DUX4L27-201ENST00000554796 1261 ntBASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 AP000842.3-202ENST00000569238 1080 ntBASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RAB40ALP0C0E4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 AL118508.1-201ENST00000613502 2345 ntBASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 SPDYE14P-201ENST00000442619 822 ntBASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 SLC25A39P2-201ENST00000537614 270 ntBASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 AC016027.1-202ENST00000607927 1699 ntBASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40ALP0C0E4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 TUBB8P12-201ENST00000308911 1335 ntBASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 TUBB7P-202ENST00000428444 1305 ntBASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 TUBB8P7-204ENST00000567960 1332 ntBASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 AC107890.1-201ENST00000422478 521 ntBASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 AC055876.3-201ENST00000431496 288 ntBASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 AC140878.1-201ENST00000565277 250 ntBASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 AL390955.2-201ENST00000603032 514 ntBASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 AC138649.4-201ENST00000612222 287 ntBASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 AJ011932.1-201ENST00000621707 465 ntBASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 LINC02012-201ENST00000608206 1725 ntBASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40ALP0C0E4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms