Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOC1P02654 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC1P02654 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC1P02654 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOC1P02654 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOC1P02654 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.81□□□□□ -0.04
APOC1P02654 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.81□□□□□ -0.04
APOC1P02654 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
APOC1P02654 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.81□□□□□ -0.04
APOC1P02654 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOC1P02654 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOC1P02654 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOC1P02654 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
APOC1P02654 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
APOC1P02654 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOC1P02654 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOC1P02654 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOC1P02654 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
APOC1P02654 AC008741.2-201ENST00000612792 3115 ntBASIC14.81□□□□□ -0.04
APOC1P02654 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.81□□□□□ -0.04
APOC1P02654 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.81□□□□□ -0.04
APOC1P02654 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOC1P02654 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOC1P02654 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOC1P02654 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.81□□□□□ -0.04
APOC1P02654 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.81□□□□□ -0.04
APOC1P02654 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.81□□□□□ -0.04
APOC1P02654 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.81□□□□□ -0.04
APOC1P02654 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOC1P02654 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.81□□□□□ -0.04
APOC1P02654 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.81□□□□□ -0.04
APOC1P02654 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.81□□□□□ -0.04
APOC1P02654 AF228730.7-201ENST00000641842 219 ntBASIC14.81□□□□□ -0.04
APOC1P02654 AL139011.1-202ENST00000642063 584 ntBASIC14.81□□□□□ -0.04
APOC1P02654 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOC1P02654 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOC1P02654 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOC1P02654 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.81□□□□□ -0.04
APOC1P02654 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOC1P02654 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOC1P02654 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.81□□□□□ -0.04
APOC1P02654 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOC1P02654 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOC1P02654 PCDHA14-201ENST00000506751 2298 ntBASIC14.81□□□□□ -0.04
APOC1P02654 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOC1P02654 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOC1P02654 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOC1P02654 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOC1P02654 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.81□□□□□ -0.04
APOC1P02654 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOC1P02654 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC1P02654 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC1P02654 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOC1P02654 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOC1P02654 AL391256.1-201ENST00000443260 1855 ntBASIC14.8□□□□□ -0.04
APOC1P02654 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.8□□□□□ -0.04
APOC1P02654 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC1P02654 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC1P02654 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.8□□□□□ -0.04
APOC1P02654 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
APOC1P02654 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC1P02654 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.8□□□□□ -0.04
APOC1P02654 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC1P02654 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOC1P02654 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.8□□□□□ -0.04
APOC1P02654 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.8□□□□□ -0.04
APOC1P02654 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
APOC1P02654 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.8□□□□□ -0.04
APOC1P02654 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC1P02654 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.8□□□□□ -0.04
APOC1P02654 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.8□□□□□ -0.04
APOC1P02654 AL732292.2-201ENST00000609649 430 ntBASIC14.8□□□□□ -0.04
APOC1P02654 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
APOC1P02654 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC1P02654 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOC1P02654 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC1P02654 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC1P02654 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.8□□□□□ -0.04
APOC1P02654 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOC1P02654 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC1P02654 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOC1P02654 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.8□□□□□ -0.04
APOC1P02654 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.8□□□□□ -0.04
APOC1P02654 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.8□□□□□ -0.04
APOC1P02654 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC1P02654 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOC1P02654 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOC1P02654 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.8□□□□□ -0.04
APOC1P02654 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC1P02654 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOC1P02654 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC1P02654 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC1P02654 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOC1P02654 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
APOC1P02654 NORAD-201ENST00000565493 5339 ntBASIC14.79□□□□□ -0.04
APOC1P02654 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOC1P02654 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC1P02654 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.79□□□□□ -0.04
APOC1P02654 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.79□□□□□ -0.04
APOC1P02654 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms