Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
OPHN1O60890 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
OPHN1O60890 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
OPHN1O60890 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.45■□□□□ 0.38
OPHN1O60890 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
OPHN1O60890 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
OPHN1O60890 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
OPHN1O60890 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.45■□□□□ 0.38
OPHN1O60890 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.45■□□□□ 0.38
OPHN1O60890 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.45■□□□□ 0.38
OPHN1O60890 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
OPHN1O60890 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
OPHN1O60890 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
OPHN1O60890 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
OPHN1O60890 RNF216P1-203ENST00000404404 2427 ntBASIC17.45■□□□□ 0.38
OPHN1O60890 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
OPHN1O60890 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
OPHN1O60890 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.45■□□□□ 0.38
OPHN1O60890 AP002414.1-201ENST00000391405 1147 ntBASIC17.45■□□□□ 0.38
OPHN1O60890 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.45■□□□□ 0.38
OPHN1O60890 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.45■□□□□ 0.38
OPHN1O60890 KRT18P27-201ENST00000427733 1299 ntBASIC17.45■□□□□ 0.38
OPHN1O60890 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.45■□□□□ 0.38
OPHN1O60890 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
OPHN1O60890 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.45■□□□□ 0.38
OPHN1O60890 AC136632.2-201ENST00000512891 861 ntBASIC17.45■□□□□ 0.38
OPHN1O60890 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
OPHN1O60890 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.45■□□□□ 0.38
OPHN1O60890 RFPL4AP1-201ENST00000530883 850 ntBASIC17.45■□□□□ 0.38
OPHN1O60890 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.45■□□□□ 0.38
OPHN1O60890 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.45■□□□□ 0.38
OPHN1O60890 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.45■□□□□ 0.38
OPHN1O60890 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
OPHN1O60890 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
OPHN1O60890 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
OPHN1O60890 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
OPHN1O60890 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
OPHN1O60890 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
OPHN1O60890 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.45■□□□□ 0.38
OPHN1O60890 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
OPHN1O60890 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
OPHN1O60890 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
OPHN1O60890 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
OPHN1O60890 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
OPHN1O60890 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
OPHN1O60890 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.45■□□□□ 0.38
OPHN1O60890 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.45■□□□□ 0.38
OPHN1O60890 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
OPHN1O60890 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.45■□□□□ 0.38
OPHN1O60890 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
OPHN1O60890 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
OPHN1O60890 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.45■□□□□ 0.38
OPHN1O60890 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
OPHN1O60890 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.45■□□□□ 0.38
OPHN1O60890 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.45■□□□□ 0.38
OPHN1O60890 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
OPHN1O60890 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
OPHN1O60890 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
OPHN1O60890 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
OPHN1O60890 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
OPHN1O60890 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.44■□□□□ 0.38
OPHN1O60890 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
OPHN1O60890 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
OPHN1O60890 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
OPHN1O60890 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
OPHN1O60890 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
OPHN1O60890 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.44■□□□□ 0.38
OPHN1O60890 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.44■□□□□ 0.38
OPHN1O60890 AC002310.6-201ENST00000624451 1377 ntBASIC17.44■□□□□ 0.38
OPHN1O60890 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
OPHN1O60890 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
OPHN1O60890 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
OPHN1O60890 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
OPHN1O60890 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
OPHN1O60890 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
OPHN1O60890 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
OPHN1O60890 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.44■□□□□ 0.38
OPHN1O60890 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
OPHN1O60890 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.44■□□□□ 0.38
OPHN1O60890 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
OPHN1O60890 AC254562.1-201ENST00000417586 456 ntBASIC17.44■□□□□ 0.38
OPHN1O60890 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.44■□□□□ 0.38
OPHN1O60890 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
OPHN1O60890 DUX4L17-201ENST00000557360 1267 ntBASIC17.44■□□□□ 0.38
OPHN1O60890 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.44■□□□□ 0.38
OPHN1O60890 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
OPHN1O60890 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.44■□□□□ 0.38
OPHN1O60890 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
OPHN1O60890 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
OPHN1O60890 AC068418.2-201ENST00000577309 3703 ntBASIC17.44■□□□□ 0.38
OPHN1O60890 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
OPHN1O60890 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
OPHN1O60890 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
OPHN1O60890 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
OPHN1O60890 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
OPHN1O60890 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
OPHN1O60890 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
OPHN1O60890 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
OPHN1O60890 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
OPHN1O60890 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms