Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.19■□□□□ 0.18
UBFD1O14562 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
UBFD1O14562 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.19■□□□□ 0.18
UBFD1O14562 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.19■□□□□ 0.18
UBFD1O14562 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBFD1O14562 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBFD1O14562 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.19■□□□□ 0.18
UBFD1O14562 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBFD1O14562 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBFD1O14562 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBFD1O14562 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
UBFD1O14562 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBFD1O14562 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBFD1O14562 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBFD1O14562 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
UBFD1O14562 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UBFD1O14562 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
UBFD1O14562 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.18■□□□□ 0.18
UBFD1O14562 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.18■□□□□ 0.18
UBFD1O14562 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBFD1O14562 AL353732.1-201ENST00000569618 1459 ntBASIC16.18■□□□□ 0.18
UBFD1O14562 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.18■□□□□ 0.18
UBFD1O14562 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBFD1O14562 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBFD1O14562 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
UBFD1O14562 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBFD1O14562 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBFD1O14562 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.18■□□□□ 0.18
UBFD1O14562 AC073621.1-201ENST00000392730 636 ntBASIC16.18■□□□□ 0.18
UBFD1O14562 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UBFD1O14562 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.18■□□□□ 0.18
UBFD1O14562 KRT18P27-201ENST00000427733 1299 ntBASIC16.18■□□□□ 0.18
UBFD1O14562 SCARNA2-201ENST00000458748 420 ntBASIC16.18■□□□□ 0.18
UBFD1O14562 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.18■□□□□ 0.18
UBFD1O14562 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
UBFD1O14562 AC107918.4-202ENST00000641623 219 ntBASIC16.18■□□□□ 0.18
UBFD1O14562 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBFD1O14562 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBFD1O14562 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
UBFD1O14562 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.18■□□□□ 0.18
UBFD1O14562 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.18■□□□□ 0.18
UBFD1O14562 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBFD1O14562 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.18■□□□□ 0.18
UBFD1O14562 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBFD1O14562 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBFD1O14562 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.18■□□□□ 0.18
UBFD1O14562 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
UBFD1O14562 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
UBFD1O14562 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
UBFD1O14562 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBFD1O14562 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
UBFD1O14562 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.18■□□□□ 0.18
UBFD1O14562 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UBFD1O14562 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.18■□□□□ 0.18
UBFD1O14562 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.18■□□□□ 0.18
UBFD1O14562 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBFD1O14562 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
UBFD1O14562 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBFD1O14562 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBFD1O14562 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBFD1O14562 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBFD1O14562 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.17■□□□□ 0.18
UBFD1O14562 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.17■□□□□ 0.18
UBFD1O14562 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBFD1O14562 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBFD1O14562 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBFD1O14562 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBFD1O14562 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBFD1O14562 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBFD1O14562 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBFD1O14562 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBFD1O14562 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBFD1O14562 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.17■□□□□ 0.18
UBFD1O14562 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBFD1O14562 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBFD1O14562 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.17■□□□□ 0.18
UBFD1O14562 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBFD1O14562 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
UBFD1O14562 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBFD1O14562 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
UBFD1O14562 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.17■□□□□ 0.18
UBFD1O14562 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBFD1O14562 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.17■□□□□ 0.18
UBFD1O14562 LAGE3P1-201ENST00000425356 484 ntBASIC16.17■□□□□ 0.18
UBFD1O14562 RPS15P9-201ENST00000494093 319 ntBASIC16.17■□□□□ 0.18
UBFD1O14562 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.17■□□□□ 0.18
UBFD1O14562 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.17■□□□□ 0.18
UBFD1O14562 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.17■□□□□ 0.18
UBFD1O14562 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.17■□□□□ 0.18
UBFD1O14562 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBFD1O14562 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.17■□□□□ 0.18
UBFD1O14562 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBFD1O14562 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBFD1O14562 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
UBFD1O14562 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.17■□□□□ 0.18
UBFD1O14562 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
UBFD1O14562 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBFD1O14562 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBFD1O14562 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
UBFD1O14562 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms