Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 TMEM198B-204ENST00000484016 896 ntBASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 AC244669.2-201ENST00000612320 853 ntBASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 AL008638.5-201ENST00000623814 1298 ntBASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 AL589702.1-201ENST00000641229 1509 ntBASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 KRT8P19-201ENST00000551916 1455 ntBASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC19.06■□□□□ 0.64
TMEM88BA6NKF7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 GRN-222ENST00000639447 1314 ntTSL 2 BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 RPS3-201ENST00000278572 907 ntTSL 3 BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 AC104457.1-201ENST00000401024 814 ntBASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 FO393414.2-201ENST00000405153 598 ntBASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 BAATP1-201ENST00000412284 1225 ntBASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 FNTAP2-201ENST00000430308 634 ntBASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 RN7SL769P-201ENST00000469386 295 ntBASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 BRI3BPP1-201ENST00000594224 787 ntBASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 MIR7845-201ENST00000618396 99 ntBASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 AL158212.4-201ENST00000624062 1286 ntBASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TMEM88BA6NKF7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms