Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AP000812.2-201ENST00000538934 718 ntBASIC21.75■■□□□ 1.07
ABCA3Q99758 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC21.75■■□□□ 1.07
ABCA3Q99758 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ABCA3Q99758 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ABCA3Q99758 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
ABCA3Q99758 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.74■■□□□ 1.07
ABCA3Q99758 GRN-214ENST00000589265 1632 ntTSL 5 BASIC21.74■■□□□ 1.07
ABCA3Q99758 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ABCA3Q99758 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ABCA3Q99758 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ABCA3Q99758 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ABCA3Q99758 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ABCA3Q99758 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ABCA3Q99758 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ABCA3Q99758 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ABCA3Q99758 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ABCA3Q99758 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ABCA3Q99758 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ABCA3Q99758 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ABCA3Q99758 APOA1-205ENST00000375329 927 ntTSL 2 BASIC21.74■■□□□ 1.07
ABCA3Q99758 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC21.74■■□□□ 1.07
ABCA3Q99758 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC21.74■■□□□ 1.07
ABCA3Q99758 OLR1-203ENST00000432556 950 ntTSL 2 BASIC21.74■■□□□ 1.07
ABCA3Q99758 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ABCA3Q99758 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC21.74■■□□□ 1.07
ABCA3Q99758 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
ABCA3Q99758 MIR4321-201ENST00000592276 80 ntBASIC21.74■■□□□ 1.07
ABCA3Q99758 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ABCA3Q99758 AC092053.1-201ENST00000605787 1936 ntBASIC21.74■■□□□ 1.07
ABCA3Q99758 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ABCA3Q99758 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
ABCA3Q99758 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ABCA3Q99758 AL512652.2-201ENST00000625156 1716 ntBASIC21.73■■□□□ 1.07
ABCA3Q99758 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC21.73■■□□□ 1.07
ABCA3Q99758 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC21.73■■□□□ 1.07
ABCA3Q99758 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC21.73■■□□□ 1.07
ABCA3Q99758 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ABCA3Q99758 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC21.73■■□□□ 1.07
ABCA3Q99758 SUOX-214ENST00000551841 906 ntTSL 3 BASIC21.73■■□□□ 1.07
ABCA3Q99758 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC21.73■■□□□ 1.07
ABCA3Q99758 AC103810.3-201ENST00000583567 96 ntBASIC21.73■■□□□ 1.07
ABCA3Q99758 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
ABCA3Q99758 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ABCA3Q99758 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC21.73■■□□□ 1.07
ABCA3Q99758 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
ABCA3Q99758 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC21.73■■□□□ 1.07
ABCA3Q99758 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
ABCA3Q99758 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC21.73■■□□□ 1.07
ABCA3Q99758 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
ABCA3Q99758 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
ABCA3Q99758 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC21.73■■□□□ 1.07
ABCA3Q99758 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ABCA3Q99758 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ABCA3Q99758 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC21.73■■□□□ 1.07
ABCA3Q99758 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ABCA3Q99758 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ABCA3Q99758 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ABCA3Q99758 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.72■■□□□ 1.07
ABCA3Q99758 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ABCA3Q99758 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ABCA3Q99758 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ABCA3Q99758 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC21.72■■□□□ 1.07
ABCA3Q99758 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC21.72■■□□□ 1.07
ABCA3Q99758 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC21.72■■□□□ 1.07
ABCA3Q99758 AL355864.2-201ENST00000447420 863 ntBASIC21.72■■□□□ 1.07
ABCA3Q99758 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC21.72■■□□□ 1.07
ABCA3Q99758 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC21.72■■□□□ 1.07
ABCA3Q99758 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC21.72■■□□□ 1.07
ABCA3Q99758 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC21.72■■□□□ 1.07
ABCA3Q99758 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ABCA3Q99758 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ABCA3Q99758 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.72■■□□□ 1.07
ABCA3Q99758 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.72■■□□□ 1.07
ABCA3Q99758 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ABCA3Q99758 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ABCA3Q99758 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC21.72■■□□□ 1.07
ABCA3Q99758 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC21.72■■□□□ 1.07
ABCA3Q99758 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ABCA3Q99758 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ABCA3Q99758 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC21.72■■□□□ 1.07
ABCA3Q99758 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ABCA3Q99758 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ABCA3Q99758 MGST3-203ENST00000367885 680 ntTSL 2 BASIC21.72■■□□□ 1.07
ABCA3Q99758 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
ABCA3Q99758 SOCS2P1-201ENST00000417727 557 ntBASIC21.72■■□□□ 1.07
ABCA3Q99758 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ABCA3Q99758 HNRNPA1P13-201ENST00000510646 963 ntBASIC21.72■■□□□ 1.07
ABCA3Q99758 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC21.72■■□□□ 1.07
ABCA3Q99758 MIR3615-201ENST00000581999 87 ntBASIC21.72■■□□□ 1.07
ABCA3Q99758 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC21.72■■□□□ 1.07
ABCA3Q99758 AL021578.1-201ENST00000613646 709 ntBASIC21.72■■□□□ 1.07
ABCA3Q99758 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
ABCA3Q99758 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ABCA3Q99758 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ABCA3Q99758 PCDHB17P-201ENST00000539533 2393 ntBASIC21.71■■□□□ 1.07
ABCA3Q99758 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ABCA3Q99758 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ABCA3Q99758 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ABCA3Q99758 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ABCA3Q99758 MSTO2P-201ENST00000314835 1709 ntBASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms