Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.87■□□□□ 0.29
CHMP6Q96FZ7 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 FAM8A6P-201ENST00000407496 1135 ntBASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 AC092647.4-201ENST00000457211 535 ntBASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 YBX1P2-201ENST00000489612 999 ntBASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 AL136038.4-201ENST00000603606 1261 ntBASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 AC011558.1-201ENST00000623459 338 ntBASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 AL009178.2-201ENST00000597278 2719 ntBASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 AC002310.6-201ENST00000624451 1377 ntBASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP6Q96FZ7 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 AC023157.3-201ENST00000619086 2088 ntBASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 AC068472.1-201ENST00000474589 881 ntBASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP6Q96FZ7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP6Q96FZ7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms