Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 AC004870.1-201ENST00000315132 882 ntBASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 KRT18P27-201ENST00000427733 1299 ntBASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 MPDU1-223ENST00000582151 728 ntBASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 AC008735.5-201ENST00000623544 497 ntBASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRAF3IP1Q8TDR0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 KRT18P67-201ENST00000432816 1264 ntBASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 SLC25A6P2-201ENST00000497974 877 ntBASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 AC105339.3-201ENST00000560043 636 ntBASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 AC091167.2-201ENST00000579581 588 ntBASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 REXO1L3P-201ENST00000622202 1288 ntBASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 AL662844.4-201ENST00000606367 2838 ntBASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAF3IP1Q8TDR0 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 TNRC18P3-201ENST00000441896 2691 ntBASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 AC073621.1-201ENST00000392730 636 ntBASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 AL356488.2-201ENST00000602755 427 ntBASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAF3IP1Q8TDR0 AC005593.1-201ENST00000624894 515 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms