Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
C3orf56Q8N813 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C3orf56Q8N813 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
C3orf56Q8N813 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.04□□□□□ -0.32
C3orf56Q8N813 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
C3orf56Q8N813 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
C3orf56Q8N813 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C3orf56Q8N813 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
C3orf56Q8N813 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C3orf56Q8N813 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
C3orf56Q8N813 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C3orf56Q8N813 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C3orf56Q8N813 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.04□□□□□ -0.32
C3orf56Q8N813 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
C3orf56Q8N813 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.04□□□□□ -0.32
C3orf56Q8N813 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C3orf56Q8N813 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.04□□□□□ -0.32
C3orf56Q8N813 AC234783.1-201ENST00000441761 496 ntBASIC13.04□□□□□ -0.32
C3orf56Q8N813 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.04□□□□□ -0.32
C3orf56Q8N813 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.04□□□□□ -0.32
C3orf56Q8N813 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.04□□□□□ -0.32
C3orf56Q8N813 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
C3orf56Q8N813 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.04□□□□□ -0.32
C3orf56Q8N813 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.04□□□□□ -0.32
C3orf56Q8N813 AL138918.1-201ENST00000568306 659 ntBASIC13.04□□□□□ -0.32
C3orf56Q8N813 MIR3909-201ENST00000579518 119 ntBASIC13.04□□□□□ -0.32
C3orf56Q8N813 MIR4525-201ENST00000580000 75 ntBASIC13.04□□□□□ -0.32
C3orf56Q8N813 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.04□□□□□ -0.32
C3orf56Q8N813 AL139327.4-201ENST00000612362 153 ntBASIC13.04□□□□□ -0.32
C3orf56Q8N813 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
C3orf56Q8N813 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
C3orf56Q8N813 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.04□□□□□ -0.32
C3orf56Q8N813 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.04□□□□□ -0.32
C3orf56Q8N813 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
C3orf56Q8N813 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
C3orf56Q8N813 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.04□□□□□ -0.32
C3orf56Q8N813 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
C3orf56Q8N813 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13.04□□□□□ -0.32
C3orf56Q8N813 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C3orf56Q8N813 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC13.04□□□□□ -0.32
C3orf56Q8N813 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
C3orf56Q8N813 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
C3orf56Q8N813 AL031598.1-201ENST00000561511 1773 ntBASIC13.04□□□□□ -0.32
C3orf56Q8N813 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
C3orf56Q8N813 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
C3orf56Q8N813 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
C3orf56Q8N813 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.04□□□□□ -0.32
C3orf56Q8N813 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
C3orf56Q8N813 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C3orf56Q8N813 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C3orf56Q8N813 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C3orf56Q8N813 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C3orf56Q8N813 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 AL391005.1-201ENST00000623953 2435 ntBASIC13.03□□□□□ -0.32
C3orf56Q8N813 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 TTTY23B-201ENST00000442790 549 ntBASIC13.03□□□□□ -0.32
C3orf56Q8N813 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 PARP8-218ENST00000513738 596 ntTSL 4 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 AC009407.1-201ENST00000568958 598 ntBASIC13.03□□□□□ -0.32
C3orf56Q8N813 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 AC008494.3-201ENST00000606615 944 ntBASIC13.03□□□□□ -0.32
C3orf56Q8N813 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms