Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 MIR1247-201ENST00000408206 136 ntBASIC20.63■□□□□ 0.89
COL23A1Q86Y22 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 FO681548.1-201ENST00000455617 1132 ntBASIC20.63■□□□□ 0.89
COL23A1Q86Y22 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 HNRNPA1P13-201ENST00000510646 963 ntBASIC20.63■□□□□ 0.89
COL23A1Q86Y22 EMC4-209ENST00000559421 497 ntTSL 2 BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 APRT-204ENST00000563655 709 ntTSL 5 BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 AC013467.2-201ENST00000605472 835 ntBASIC20.63■□□□□ 0.89
COL23A1Q86Y22 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL23A1Q86Y22 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL23A1Q86Y22 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL23A1Q86Y22 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL23A1Q86Y22 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL23A1Q86Y22 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
COL23A1Q86Y22 DEK-201ENST00000244776 1441 ntTSL 2 BASIC20.62■□□□□ 0.89
COL23A1Q86Y22 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.62■□□□□ 0.89
COL23A1Q86Y22 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL23A1Q86Y22 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL23A1Q86Y22 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL23A1Q86Y22 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC20.62■□□□□ 0.89
COL23A1Q86Y22 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL23A1Q86Y22 ACTG1P3-201ENST00000431775 1114 ntBASIC20.62■□□□□ 0.89
COL23A1Q86Y22 RN7SL399P-201ENST00000471648 279 ntBASIC20.62■□□□□ 0.89
COL23A1Q86Y22 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC20.62■□□□□ 0.89
COL23A1Q86Y22 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC20.62■□□□□ 0.89
COL23A1Q86Y22 RHOQP1-201ENST00000555758 579 ntBASIC20.62■□□□□ 0.89
COL23A1Q86Y22 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC20.62■□□□□ 0.89
COL23A1Q86Y22 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL23A1Q86Y22 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
COL23A1Q86Y22 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL23A1Q86Y22 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL23A1Q86Y22 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL23A1Q86Y22 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
COL23A1Q86Y22 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL23A1Q86Y22 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL23A1Q86Y22 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL23A1Q86Y22 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.61■□□□□ 0.89
COL23A1Q86Y22 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL23A1Q86Y22 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.61■□□□□ 0.89
COL23A1Q86Y22 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL23A1Q86Y22 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL23A1Q86Y22 GPAA1P2-201ENST00000417923 928 ntBASIC20.61■□□□□ 0.89
COL23A1Q86Y22 FAM21FP-201ENST00000426241 1131 ntBASIC20.61■□□□□ 0.89
COL23A1Q86Y22 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC20.61■□□□□ 0.89
COL23A1Q86Y22 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC20.61■□□□□ 0.89
COL23A1Q86Y22 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC20.61■□□□□ 0.89
COL23A1Q86Y22 AL022328.1-201ENST00000610050 478 ntBASIC20.61■□□□□ 0.89
COL23A1Q86Y22 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.61■□□□□ 0.89
COL23A1Q86Y22 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.61■□□□□ 0.89
COL23A1Q86Y22 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
COL23A1Q86Y22 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL23A1Q86Y22 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.61■□□□□ 0.89
COL23A1Q86Y22 KRT8P22-201ENST00000562317 1415 ntBASIC20.61■□□□□ 0.89
COL23A1Q86Y22 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL23A1Q86Y22 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 RPL7P3-201ENST00000441388 714 ntBASIC20.6■□□□□ 0.89
COL23A1Q86Y22 BCRP2-202ENST00000447763 634 ntBASIC20.6■□□□□ 0.89
COL23A1Q86Y22 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 PTK7-212ENST00000476760 902 ntTSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms