Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 CTBP2P3-201ENST00000585629 1255 ntBASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 AC093726.1-201ENST00000608064 963 ntBASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 AC092053.1-201ENST00000605787 1936 ntBASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 AL512343.1-201ENST00000605837 169 ntBASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNKSR3Q6P9H4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CNKSR3Q6P9H4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNKSR3Q6P9H4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.73■□□□□ 0.43
CNKSR3Q6P9H4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNKSR3Q6P9H4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.73■□□□□ 0.43
CNKSR3Q6P9H4 HTR7P1-202ENST00000624664 4411 ntBASIC17.73■□□□□ 0.43
CNKSR3Q6P9H4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.73■□□□□ 0.43
CNKSR3Q6P9H4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNKSR3Q6P9H4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNKSR3Q6P9H4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CNKSR3Q6P9H4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.73■□□□□ 0.43
CNKSR3Q6P9H4 AL589987.1-201ENST00000453380 819 ntBASIC17.73■□□□□ 0.43
CNKSR3Q6P9H4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.73■□□□□ 0.43
CNKSR3Q6P9H4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CNKSR3Q6P9H4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.73■□□□□ 0.43
CNKSR3Q6P9H4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.73■□□□□ 0.43
CNKSR3Q6P9H4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.73■□□□□ 0.43
CNKSR3Q6P9H4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNKSR3Q6P9H4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CNKSR3Q6P9H4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.73■□□□□ 0.43
CNKSR3Q6P9H4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNKSR3Q6P9H4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNKSR3Q6P9H4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNKSR3Q6P9H4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNKSR3Q6P9H4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNKSR3Q6P9H4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CNKSR3Q6P9H4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNKSR3Q6P9H4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CNKSR3Q6P9H4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNKSR3Q6P9H4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms