Protein–RNA interactions for Protein: Q5FWE3

PRRT3, Proline-rich transmembrane protein 3, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRT3Q5FWE3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRRT3Q5FWE3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.32■□□□□ 0.2
PRRT3Q5FWE3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PRRT3Q5FWE3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.32■□□□□ 0.2
PRRT3Q5FWE3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.32■□□□□ 0.2
PRRT3Q5FWE3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.32■□□□□ 0.2
PRRT3Q5FWE3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.32■□□□□ 0.2
PRRT3Q5FWE3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PRRT3Q5FWE3 LINC00895-201ENST00000629028 1637 ntBASIC16.32■□□□□ 0.2
PRRT3Q5FWE3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
PRRT3Q5FWE3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRRT3Q5FWE3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRRT3Q5FWE3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRRT3Q5FWE3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRRT3Q5FWE3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRRT3Q5FWE3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRRT3Q5FWE3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 AC060834.1-201ENST00000443027 2032 ntBASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 IGHV3-42-201ENST00000520410 361 ntBASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 AC140878.1-201ENST00000565277 250 ntBASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 MIR4745-201ENST00000577608 62 ntBASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.31■□□□□ 0.2
PRRT3Q5FWE3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 FO538757.1-201ENST00000623083 1397 ntBASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 TREML5P-201ENST00000421694 576 ntBASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 AJ011932.1-201ENST00000621707 465 ntBASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRRT3Q5FWE3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
PRRT3Q5FWE3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRRT3Q5FWE3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRRT3Q5FWE3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.29■□□□□ 0.2
PRRT3Q5FWE3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRRT3Q5FWE3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.29■□□□□ 0.2
PRRT3Q5FWE3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRRT3Q5FWE3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms