Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.06■□□□□ 0.48
TRIM71Q2Q1W2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 AC067852.2-201ENST00000590513 2313 ntBASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 AC093724.1-201ENST00000448659 1027 ntBASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 AC104794.3-201ENST00000566840 1248 ntBASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TRIM71Q2Q1W2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 AC020916.1-201ENST00000587762 1774 ntBASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 AL139011.1-202ENST00000642063 584 ntBASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM71Q2Q1W2 AL512652.2-201ENST00000625156 1716 ntBASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 DGCR5-201ENST00000399539 862 ntBASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 ARSEP1-201ENST00000420443 635 ntBASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 DFFBP1-201ENST00000433250 979 ntBASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 SPDYE18-201ENST00000510091 1050 ntBASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 AL359881.2-201ENST00000602973 570 ntBASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms