Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC11.86□□□□□ -0.51
RPL39P62891 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC11.86□□□□□ -0.51
RPL39P62891 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC11.86□□□□□ -0.51
RPL39P62891 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RPL39P62891 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RPL39P62891 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC11.86□□□□□ -0.51
RPL39P62891 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
RPL39P62891 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
RPL39P62891 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RPL39P62891 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
RPL39P62891 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
RPL39P62891 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
RPL39P62891 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC11.86□□□□□ -0.51
RPL39P62891 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RPL39P62891 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RPL39P62891 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RPL39P62891 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
RPL39P62891 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RPL39P62891 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RPL39P62891 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC11.86□□□□□ -0.51
RPL39P62891 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC11.86□□□□□ -0.51
RPL39P62891 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RPL39P62891 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RPL39P62891 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RPL39P62891 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC11.86□□□□□ -0.51
RPL39P62891 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC11.86□□□□□ -0.51
RPL39P62891 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
RPL39P62891 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
RPL39P62891 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC11.85□□□□□ -0.51
RPL39P62891 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
RPL39P62891 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
RPL39P62891 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RPL39P62891 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RPL39P62891 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RPL39P62891 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RPL39P62891 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RPL39P62891 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RPL39P62891 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RPL39P62891 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RPL39P62891 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RPL39P62891 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RPL39P62891 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC11.85□□□□□ -0.51
RPL39P62891 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RPL39P62891 AC003669.1-201ENST00000334569 611 ntBASIC11.85□□□□□ -0.51
RPL39P62891 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RPL39P62891 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
RPL39P62891 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RPL39P62891 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC11.85□□□□□ -0.51
RPL39P62891 SNX5-210ENST00000481323 562 ntTSL 3 BASIC11.85□□□□□ -0.51
RPL39P62891 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC11.85□□□□□ -0.51
RPL39P62891 VENTXP5-201ENST00000523979 775 ntBASIC11.85□□□□□ -0.51
RPL39P62891 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RPL39P62891 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RPL39P62891 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC11.85□□□□□ -0.51
RPL39P62891 AL138831.2-201ENST00000606564 490 ntBASIC11.85□□□□□ -0.51
RPL39P62891 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC11.85□□□□□ -0.51
RPL39P62891 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RPL39P62891 AC011558.1-201ENST00000623459 338 ntBASIC11.85□□□□□ -0.51
RPL39P62891 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
RPL39P62891 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC11.85□□□□□ -0.51
RPL39P62891 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
RPL39P62891 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RPL39P62891 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC11.85□□□□□ -0.51
RPL39P62891 AC132938.5-201ENST00000624980 1813 ntBASIC11.85□□□□□ -0.51
RPL39P62891 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RPL39P62891 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RPL39P62891 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC11.85□□□□□ -0.51
RPL39P62891 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC11.85□□□□□ -0.51
RPL39P62891 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RPL39P62891 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RPL39P62891 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
RPL39P62891 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
RPL39P62891 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
RPL39P62891 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RPL39P62891 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC11.84□□□□□ -0.51
RPL39P62891 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RPL39P62891 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC11.84□□□□□ -0.51
RPL39P62891 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RPL39P62891 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RPL39P62891 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC11.84□□□□□ -0.51
RPL39P62891 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RPL39P62891 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RPL39P62891 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RPL39P62891 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RPL39P62891 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
RPL39P62891 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RPL39P62891 SP100-205ENST00000409824 1802 ntTSL 5 BASIC11.84□□□□□ -0.51
RPL39P62891 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RPL39P62891 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RPL39P62891 AL021920.2-201ENST00000624828 1351 ntBASIC11.84□□□□□ -0.51
RPL39P62891 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
RPL39P62891 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RPL39P62891 HBZP1-201ENST00000354915 429 ntBASIC11.84□□□□□ -0.51
RPL39P62891 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RPL39P62891 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RPL39P62891 LIN28AP1-201ENST00000429574 405 ntBASIC11.84□□□□□ -0.51
RPL39P62891 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RPL39P62891 NKTR-203ENST00000442970 646 ntTSL 2 BASIC11.84□□□□□ -0.51
RPL39P62891 ATP5G1P1-201ENST00000448724 379 ntBASIC11.84□□□□□ -0.51
RPL39P62891 DUX4L17-201ENST00000557360 1267 ntBASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms