Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SRP54P61011 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.47■□□□□ 0.23
SRP54P61011 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRP54P61011 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRP54P61011 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SRP54P61011 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRP54P61011 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.47■□□□□ 0.23
SRP54P61011 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.47■□□□□ 0.23
SRP54P61011 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
SRP54P61011 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.46■□□□□ 0.23
SRP54P61011 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
SRP54P61011 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SRP54P61011 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SRP54P61011 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SRP54P61011 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SRP54P61011 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SRP54P61011 AL023806.1-201ENST00000603994 1649 ntBASIC16.46■□□□□ 0.23
SRP54P61011 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SRP54P61011 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SRP54P61011 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.46■□□□□ 0.23
SRP54P61011 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SRP54P61011 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SRP54P61011 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.46■□□□□ 0.23
SRP54P61011 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.46■□□□□ 0.23
SRP54P61011 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.46■□□□□ 0.23
SRP54P61011 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SRP54P61011 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SRP54P61011 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.46■□□□□ 0.23
SRP54P61011 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SRP54P61011 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SRP54P61011 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.46■□□□□ 0.23
SRP54P61011 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.46■□□□□ 0.23
SRP54P61011 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.46■□□□□ 0.23
SRP54P61011 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SRP54P61011 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.46■□□□□ 0.23
SRP54P61011 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SRP54P61011 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SRP54P61011 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SRP54P61011 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SRP54P61011 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SRP54P61011 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SRP54P61011 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SRP54P61011 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SRP54P61011 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SRP54P61011 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.46■□□□□ 0.23
SRP54P61011 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.46■□□□□ 0.22
SRP54P61011 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SRP54P61011 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP54P61011 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP54P61011 UXT-AS1-201ENST00000590504 1525 ntBASIC16.45■□□□□ 0.22
SRP54P61011 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP54P61011 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP54P61011 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.45■□□□□ 0.22
SRP54P61011 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SRP54P61011 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP54P61011 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.45■□□□□ 0.22
SRP54P61011 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP54P61011 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP54P61011 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.45■□□□□ 0.22
SRP54P61011 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SRP54P61011 FAM58DP-201ENST00000428076 619 ntBASIC16.45■□□□□ 0.22
SRP54P61011 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SRP54P61011 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP54P61011 KRT8P23-201ENST00000560090 1207 ntBASIC16.45■□□□□ 0.22
SRP54P61011 LINC01225-203ENST00000563550 1244 ntBASIC16.45■□□□□ 0.22
SRP54P61011 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SRP54P61011 AC021097.1-201ENST00000607902 574 ntBASIC16.45■□□□□ 0.22
SRP54P61011 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
SRP54P61011 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.45■□□□□ 0.22
SRP54P61011 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP54P61011 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.45■□□□□ 0.22
SRP54P61011 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SRP54P61011 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP54P61011 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.45■□□□□ 0.22
SRP54P61011 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.45■□□□□ 0.22
SRP54P61011 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SRP54P61011 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SRP54P61011 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP54P61011 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP54P61011 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SRP54P61011 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.45■□□□□ 0.22
SRP54P61011 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP54P61011 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SRP54P61011 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP54P61011 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SRP54P61011 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP54P61011 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP54P61011 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRP54P61011 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SRP54P61011 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
SRP54P61011 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SRP54P61011 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
SRP54P61011 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRP54P61011 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRP54P61011 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.44■□□□□ 0.22
SRP54P61011 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SRP54P61011 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRP54P61011 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRP54P61011 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SRP54P61011 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms