Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
HTTP42858 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HTTP42858 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HTTP42858 CLK3P2-201ENST00000427566 1453 ntBASIC18.43■□□□□ 0.54
HTTP42858 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HTTP42858 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
HTTP42858 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HTTP42858 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HTTP42858 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC18.43■□□□□ 0.54
HTTP42858 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.43■□□□□ 0.54
HTTP42858 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HTTP42858 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HTTP42858 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HTTP42858 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.42■□□□□ 0.54
HTTP42858 AC004408.2-201ENST00000623613 2777 ntBASIC18.42■□□□□ 0.54
HTTP42858 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
HTTP42858 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HTTP42858 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HTTP42858 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.42■□□□□ 0.54
HTTP42858 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.42■□□□□ 0.54
HTTP42858 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
HTTP42858 AC253536.4-201ENST00000440539 267 ntBASIC18.42■□□□□ 0.54
HTTP42858 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.42■□□□□ 0.54
HTTP42858 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HTTP42858 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HTTP42858 SNX33P1-201ENST00000592116 1762 ntBASIC18.42■□□□□ 0.54
HTTP42858 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HTTP42858 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.42■□□□□ 0.54
HTTP42858 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HTTP42858 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HTTP42858 AC026954.1-201ENST00000429771 1293 ntBASIC18.42■□□□□ 0.54
HTTP42858 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC18.42■□□□□ 0.54
HTTP42858 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.42■□□□□ 0.54
HTTP42858 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.42■□□□□ 0.54
HTTP42858 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HTTP42858 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.42■□□□□ 0.54
HTTP42858 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.42■□□□□ 0.54
HTTP42858 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.42■□□□□ 0.54
HTTP42858 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
HTTP42858 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HTTP42858 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HTTP42858 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
HTTP42858 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HTTP42858 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.41■□□□□ 0.54
HTTP42858 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HTTP42858 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HTTP42858 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC18.41■□□□□ 0.54
HTTP42858 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
HTTP42858 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HTTP42858 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HTTP42858 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.41■□□□□ 0.54
HTTP42858 PP12613-201ENST00000424958 2230 ntBASIC18.41■□□□□ 0.54
HTTP42858 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HTTP42858 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HTTP42858 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
HTTP42858 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HTTP42858 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HTTP42858 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
HTTP42858 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HTTP42858 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC18.41■□□□□ 0.54
HTTP42858 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.41■□□□□ 0.54
HTTP42858 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HTTP42858 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
HTTP42858 AL158212.4-201ENST00000624062 1286 ntBASIC18.41■□□□□ 0.54
HTTP42858 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HTTP42858 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HTTP42858 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HTTP42858 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HTTP42858 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HTTP42858 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HTTP42858 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.41■□□□□ 0.54
HTTP42858 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HTTP42858 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HTTP42858 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HTTP42858 GGCT-203ENST00000409144 836 ntTSL 2 BASIC18.4■□□□□ 0.54
HTTP42858 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HTTP42858 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HTTP42858 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.4■□□□□ 0.54
HTTP42858 AC074044.1-201ENST00000609673 707 ntBASIC18.4■□□□□ 0.54
HTTP42858 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HTTP42858 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HTTP42858 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTTP42858 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
HTTP42858 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTTP42858 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTTP42858 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
HTTP42858 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTTP42858 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HTTP42858 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTTP42858 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HTTP42858 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HTTP42858 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HTTP42858 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC18.4■□□□□ 0.54
HTTP42858 AP001258.2-201ENST00000529891 490 ntBASIC18.4■□□□□ 0.54
HTTP42858 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.4■□□□□ 0.54
HTTP42858 CHMP4BP1-201ENST00000556017 588 ntBASIC18.4■□□□□ 0.54
HTTP42858 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC18.4■□□□□ 0.54
HTTP42858 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC18.4■□□□□ 0.54
HTTP42858 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.4■□□□□ 0.54
HTTP42858 AC016629.1-201ENST00000596579 586 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms