Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.56■□□□□ 0.08
TPRP12270 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.56■□□□□ 0.08
TPRP12270 AC097724.1-201ENST00000609581 426 ntBASIC15.56■□□□□ 0.08
TPRP12270 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPRP12270 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.56■□□□□ 0.08
TPRP12270 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.56■□□□□ 0.08
TPRP12270 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPRP12270 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPRP12270 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TPRP12270 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.56■□□□□ 0.08
TPRP12270 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPRP12270 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
TPRP12270 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TPRP12270 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TPRP12270 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.56■□□□□ 0.08
TPRP12270 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.56■□□□□ 0.08
TPRP12270 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPRP12270 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.56■□□□□ 0.08
TPRP12270 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.56■□□□□ 0.08
TPRP12270 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.56■□□□□ 0.08
TPRP12270 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.56■□□□□ 0.08
TPRP12270 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.56■□□□□ 0.08
TPRP12270 AC008267.1-201ENST00000474858 1069 ntBASIC15.56■□□□□ 0.08
TPRP12270 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.56■□□□□ 0.08
TPRP12270 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.56■□□□□ 0.08
TPRP12270 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
TPRP12270 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.56■□□□□ 0.08
TPRP12270 NDUFV2P1-201ENST00000596415 907 ntBASIC15.56■□□□□ 0.08
TPRP12270 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPRP12270 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPRP12270 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TPRP12270 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPRP12270 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPRP12270 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
TPRP12270 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPRP12270 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TPRP12270 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPRP12270 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TPRP12270 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPRP12270 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPRP12270 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TPRP12270 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TPRP12270 KRT8P22-201ENST00000562317 1415 ntBASIC15.55■□□□□ 0.08
TPRP12270 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPRP12270 AL135999.2-201ENST00000622438 1686 ntBASIC15.55■□□□□ 0.08
TPRP12270 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPRP12270 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPRP12270 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.55■□□□□ 0.08
TPRP12270 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPRP12270 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPRP12270 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TPRP12270 FNTAP2-201ENST00000430308 634 ntBASIC15.55■□□□□ 0.08
TPRP12270 AC007969.1-201ENST00000433675 447 ntBASIC15.55■□□□□ 0.08
TPRP12270 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.55■□□□□ 0.08
TPRP12270 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
TPRP12270 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TPRP12270 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.55■□□□□ 0.08
TPRP12270 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.55■□□□□ 0.08
TPRP12270 AL031055.1-201ENST00000606362 631 ntBASIC15.55■□□□□ 0.08
TPRP12270 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.55■□□□□ 0.08
TPRP12270 AC005332.7-201ENST00000614046 2005 ntBASIC15.55■□□□□ 0.08
TPRP12270 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPRP12270 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPRP12270 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPRP12270 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TPRP12270 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.55■□□□□ 0.08
TPRP12270 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TPRP12270 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.55■□□□□ 0.08
TPRP12270 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPRP12270 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TPRP12270 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TPRP12270 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TPRP12270 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.55■□□□□ 0.08
TPRP12270 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TPRP12270 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPRP12270 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TPRP12270 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TPRP12270 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.55■□□□□ 0.08
TPRP12270 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.55■□□□□ 0.08
TPRP12270 AC105021.1-202ENST00000570572 669 ntBASIC15.55■□□□□ 0.08
TPRP12270 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.55■□□□□ 0.08
TPRP12270 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.55■□□□□ 0.08
TPRP12270 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPRP12270 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPRP12270 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TPRP12270 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TPRP12270 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TPRP12270 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TPRP12270 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TPRP12270 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.54■□□□□ 0.08
TPRP12270 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TPRP12270 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TPRP12270 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.54■□□□□ 0.08
TPRP12270 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TPRP12270 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.54■□□□□ 0.08
TPRP12270 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TPRP12270 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.54■□□□□ 0.08
TPRP12270 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TPRP12270 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.54■□□□□ 0.08
TPRP12270 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms