Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SOX1O00570 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.53■□□□□ 0.4
SOX1O00570 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SOX1O00570 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SOX1O00570 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SOX1O00570 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SOX1O00570 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SOX1O00570 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SOX1O00570 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SOX1O00570 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SOX1O00570 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
SOX1O00570 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
SOX1O00570 AC007969.1-201ENST00000433675 447 ntBASIC17.53■□□□□ 0.4
SOX1O00570 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.53■□□□□ 0.4
SOX1O00570 TIMM17BP1-201ENST00000545713 516 ntBASIC17.53■□□□□ 0.4
SOX1O00570 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.53■□□□□ 0.4
SOX1O00570 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.53■□□□□ 0.4
SOX1O00570 MIR3619-201ENST00000579667 83 ntBASIC17.53■□□□□ 0.4
SOX1O00570 MIR4750-201ENST00000584564 56 ntBASIC17.53■□□□□ 0.4
SOX1O00570 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SOX1O00570 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.53■□□□□ 0.4
SOX1O00570 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.53■□□□□ 0.4
SOX1O00570 AP003419.4-201ENST00000616071 517 ntBASIC17.53■□□□□ 0.4
SOX1O00570 HLA-C-210ENST00000640219 976 ntBASIC17.53■□□□□ 0.4
SOX1O00570 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.53■□□□□ 0.4
SOX1O00570 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SOX1O00570 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SOX1O00570 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SOX1O00570 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SOX1O00570 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.53■□□□□ 0.4
SOX1O00570 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.53■□□□□ 0.4
SOX1O00570 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.53■□□□□ 0.4
SOX1O00570 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SOX1O00570 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SOX1O00570 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SOX1O00570 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.52■□□□□ 0.4
SOX1O00570 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SOX1O00570 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SOX1O00570 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SOX1O00570 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SOX1O00570 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.52■□□□□ 0.4
SOX1O00570 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.52■□□□□ 0.4
SOX1O00570 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SOX1O00570 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SOX1O00570 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.52■□□□□ 0.4
SOX1O00570 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SOX1O00570 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SOX1O00570 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.52■□□□□ 0.4
SOX1O00570 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.52■□□□□ 0.4
SOX1O00570 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SOX1O00570 PTP4A1P2-201ENST00000546033 454 ntBASIC17.52■□□□□ 0.4
SOX1O00570 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
SOX1O00570 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SOX1O00570 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.52■□□□□ 0.4
SOX1O00570 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.52■□□□□ 0.4
SOX1O00570 AC008687.7-202ENST00000637404 953 ntBASIC17.52■□□□□ 0.4
SOX1O00570 AC138627.1-207ENST00000641560 1006 ntBASIC17.52■□□□□ 0.4
SOX1O00570 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SOX1O00570 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
SOX1O00570 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SOX1O00570 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.52■□□□□ 0.4
SOX1O00570 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SOX1O00570 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.52■□□□□ 0.4
SOX1O00570 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SOX1O00570 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.52■□□□□ 0.39
SOX1O00570 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SOX1O00570 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SOX1O00570 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SOX1O00570 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
SOX1O00570 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SOX1O00570 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
SOX1O00570 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SOX1O00570 AP000997.3-201ENST00000623333 2250 ntBASIC17.51■□□□□ 0.39
SOX1O00570 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SOX1O00570 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SOX1O00570 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SOX1O00570 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.51■□□□□ 0.39
SOX1O00570 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SOX1O00570 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SOX1O00570 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SOX1O00570 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SOX1O00570 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.51■□□□□ 0.39
SOX1O00570 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.51■□□□□ 0.39
SOX1O00570 AL442647.2-201ENST00000429864 857 ntBASIC17.51■□□□□ 0.39
SOX1O00570 AL355864.2-201ENST00000447420 863 ntBASIC17.51■□□□□ 0.39
SOX1O00570 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SOX1O00570 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
SOX1O00570 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.51■□□□□ 0.39
SOX1O00570 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.51■□□□□ 0.39
SOX1O00570 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.51■□□□□ 0.39
SOX1O00570 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.51■□□□□ 0.39
SOX1O00570 AC097724.1-201ENST00000609581 426 ntBASIC17.51■□□□□ 0.39
SOX1O00570 AC074044.1-201ENST00000609673 707 ntBASIC17.51■□□□□ 0.39
SOX1O00570 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.51■□□□□ 0.39
SOX1O00570 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SOX1O00570 RHOXF1P1-202ENST00000635473 501 ntBASIC17.51■□□□□ 0.39
SOX1O00570 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.51■□□□□ 0.39
SOX1O00570 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SOX1O00570 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SOX1O00570 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms