Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.87■□□□□ 0.45
FOXN3O00409 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN3O00409 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN3O00409 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.87■□□□□ 0.45
FOXN3O00409 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN3O00409 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN3O00409 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN3O00409 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN3O00409 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN3O00409 IGLL3P-201ENST00000412472 434 ntBASIC17.87■□□□□ 0.45
FOXN3O00409 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.87■□□□□ 0.45
FOXN3O00409 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.87■□□□□ 0.45
FOXN3O00409 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.87■□□□□ 0.45
FOXN3O00409 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.87■□□□□ 0.45
FOXN3O00409 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.87■□□□□ 0.45
FOXN3O00409 MIR4515-201ENST00000584082 81 ntBASIC17.87■□□□□ 0.45
FOXN3O00409 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.87■□□□□ 0.45
FOXN3O00409 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.87■□□□□ 0.45
FOXN3O00409 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.87■□□□□ 0.45
FOXN3O00409 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN3O00409 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.87■□□□□ 0.45
FOXN3O00409 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.87■□□□□ 0.45
FOXN3O00409 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN3O00409 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
FOXN3O00409 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN3O00409 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.87■□□□□ 0.45
FOXN3O00409 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN3O00409 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN3O00409 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN3O00409 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.87■□□□□ 0.45
FOXN3O00409 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN3O00409 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN3O00409 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN3O00409 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN3O00409 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.86■□□□□ 0.45
FOXN3O00409 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN3O00409 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.86■□□□□ 0.45
FOXN3O00409 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
FOXN3O00409 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN3O00409 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN3O00409 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN3O00409 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
FOXN3O00409 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
FOXN3O00409 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.86■□□□□ 0.45
FOXN3O00409 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.86■□□□□ 0.45
FOXN3O00409 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
FOXN3O00409 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN3O00409 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
FOXN3O00409 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.86■□□□□ 0.45
FOXN3O00409 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.86■□□□□ 0.45
FOXN3O00409 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN3O00409 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.86■□□□□ 0.45
FOXN3O00409 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.86■□□□□ 0.45
FOXN3O00409 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN3O00409 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.86■□□□□ 0.45
FOXN3O00409 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN3O00409 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
FOXN3O00409 PCDHA1-201ENST00000378133 2726 ntBASIC17.86■□□□□ 0.45
FOXN3O00409 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.86■□□□□ 0.45
FOXN3O00409 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN3O00409 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN3O00409 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN3O00409 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.86■□□□□ 0.45
FOXN3O00409 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
FOXN3O00409 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN3O00409 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.86■□□□□ 0.45
FOXN3O00409 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN3O00409 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.86■□□□□ 0.45
FOXN3O00409 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN3O00409 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN3O00409 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.86■□□□□ 0.45
FOXN3O00409 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN3O00409 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN3O00409 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN3O00409 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
FOXN3O00409 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN3O00409 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
FOXN3O00409 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN3O00409 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN3O00409 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
FOXN3O00409 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN3O00409 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN3O00409 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN3O00409 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.85■□□□□ 0.45
FOXN3O00409 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN3O00409 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN3O00409 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.85■□□□□ 0.45
FOXN3O00409 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.85■□□□□ 0.45
FOXN3O00409 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN3O00409 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.85■□□□□ 0.45
FOXN3O00409 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
FOXN3O00409 HMGA1P7-201ENST00000406908 502 ntBASIC17.85■□□□□ 0.45
FOXN3O00409 CRYGEP-201ENST00000412192 528 ntBASIC17.85■□□□□ 0.45
FOXN3O00409 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.85■□□□□ 0.45
FOXN3O00409 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.85■□□□□ 0.45
FOXN3O00409 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.85■□□□□ 0.45
FOXN3O00409 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.85■□□□□ 0.45
FOXN3O00409 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.85■□□□□ 0.45
FOXN3O00409 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.85■□□□□ 0.45
FOXN3O00409 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms